RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 HMX1Q9NP08 348 aaPredicted RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 DISC1Q9NRI5 854 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 NSFP46459 744 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 STAT5BP51692 787 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 MTA1Q13330 715 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 MICALCLQ6ZW33 695 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 MRPL47Q9HD33 250 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 ABL1P00519 1130 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 RALAP11233 206 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 CYP2B6P20813 491 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 GJC1P36383 396 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 PLD1Q13393 1074 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 ERCC6LQ2NKX8 1250 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 CD302Q8IX05 232 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 COLEC11Q9BWP8 271 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 VTA1Q9NP79 307 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 LOC102724159A0A0B4J2E5 919 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 EEF1GP26641 437 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 LRRC63Q05C16 580 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 ZNF543Q08ER8 600 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 PWP2Q15269 919 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 DCAF4L1Q3SXM0 396 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 C10orf76Q5T2E6 689 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 DCP1BQ8IZD4 617 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 DPF3Q92784 378 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 TSPYL1Q9H0U9 437 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 ANTXR1Q9H6X2 564 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 TLR7Q9NYK1 1049 aaKnown RBP14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 NDUFB9Q9Y6M9 179 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 UBE4BO95155 1302 aa14.62□□□□□ -0.07
PRPF38A-201ENST00000257181 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 TMEM110-MUSTN1A8MSY1 372 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 CYP21A2P08686 494 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 RAB27AP51159 221 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ARHGAP4P98171 946 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 PTH1RQ03431 593 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 SPECC1LQ69YQ0 1117 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ENOSF1Q7L5Y1 443 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ANAPC4Q9UJX5 808 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 MYPNQ86TC9 1320 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 GLB1LQ6UWU2 654 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 RIT2Q99578 217 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 PCDHB7Q9Y5E2 793 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 GLTPD2A6NH11 291 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 HSF2BPO75031 334 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 DGAT1O75907 488 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 CACNB3P54284 484 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ELAVL2Q12926 359 aaKnown RBP14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 SLC39A14Q15043 492 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 EEPD1Q7L9B9 569 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 SGMS1Q86VZ5 419 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 NELFCDQ8IXH7 590 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 CLDN3O15551 220 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ZNF667Q5HYK9 610 aa14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 LSM7Q9UK45 103 aaKnown RBP14.61□□□□□ -0.07
PRPF38A-201ENST00000257181 ATRNO75882 1429 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 STK25O00506 426 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 FSTL1Q12841 308 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 PTPAQ15257 358 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 ADGRF4Q8IZF3 695 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 ICAM1P05362 532 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 PLA2G4BP0C869 781 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 BFSP1Q12934 665 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 FAM186BQ8IYM0 893 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 CYBBP04839 570 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 GPC3P51654 580 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 C6orf163Q5TEZ5 329 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 OPTNQ96CV9 577 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 IL18RAPO95256 599 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 AFPP02771 609 aaKnown RBP14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 Q3C1V9 767 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 KIAA1683Q9H0B3 1180 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
PRPF38A-201ENST00000257181 UBE2Q2LH0YL09 131 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 VAV2P52735 878 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PAK2Q13177 524 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 ATG9AQ7Z3C6 839 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PROM2Q8N271 834 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 CDCA5Q96FF9 252 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 MSRAQ9UJ68 235 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PXDNQ92626 1479 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 AKR1A1P14550 325 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 PPP1R21Q6ZMI0 780 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 SAMD7Q7Z3H4 446 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 TNIP3Q96KP6 325 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 NLRP4Q96MN2 994 aa14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 MTG1Q9BT17 334 aaPredicted RBP14.59□□□□□ -0.07
PRPF38A-201ENST00000257181 TMX2Q9Y320 296 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms