RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SLC9C1Q4G0N8 1177 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 TBC1D5Q92609 795 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 RUSC1Q9BVN2 902 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 BHMT2Q9H2M3 363 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 RGL1Q9NZL6 768 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 TRAF3IP3Q9Y228 551 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 PSME4Q14997 1843 aa21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 ERICH4A6NGS2 130 aa21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 PPIP5K2O43314 1243 aa21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 N4BP1O75113 896 aaKnown RBP21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 STAT2P52630 851 aa21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 KNOP1Q1ED39 458 aaKnown RBP21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 EIF2AK1Q9BQI3 630 aaKnown RBP21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 NUCKS1Q9H1E3 243 aaKnown RBP21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 GANQ9H2C0 597 aa21.52■■□□□ 1.04
CDC42EP1-201ENST00000249014 TARSL2A2RTX5 802 aaKnown RBP21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZMYND10O75800 440 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 PRPF6O94906 941 aaKnown RBP21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZNF76P36508 570 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 NFRKBQ6P4R8 1299 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 CLRN2A0PK11 232 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 PRLRP16471 622 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 ALS2CR12Q96Q35 445 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 OSBPL9Q96SU4 736 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 POLR3CQ9BUI4 534 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 WDR18Q9BV38 432 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 HDAC9Q9UKV0 1011 aa21.51■■□□□ 1.03
CDC42EP1-201ENST00000249014 NCK2O43639 380 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 BUB1O43683 1085 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 RAPGEF1Q13905 1077 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 DPY19L2P1Q6NXN4 242 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 PSMB7Q99436 277 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 SYNPO2Q9UMS6 1093 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 RBBP6Q7Z6E9 1792 aaKnown RBP21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 CFBP00751 764 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 POLD1P28340 1107 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 CXCR5P32302 372 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 ARID5AQ03989 594 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 TMX2Q9Y320 296 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 RABGAP1Q9Y3P9 1069 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 STK24Q9Y6E0 443 aa21.5■■□□□ 1.03
CDC42EP1-201ENST00000249014 KIF13BQ9NQT8 1826 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 SPDYE2BA6NHP3 402 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 C21orf2O43822 256 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 EYA4O95677 639 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 SPDYE6P0CI01 402 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 ACTN1P12814 892 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 EPS15P42566 896 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZNF572Q7Z3I7 529 aaPredicted RBP21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 FRMD5Q7Z6J6 570 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 FAM133AQ8N9E0 248 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 AIPL1Q9NZN9 384 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 ASTN1O14525 1302 aa21.49■■□□□ 1.03
CDC42EP1-201ENST00000249014 PDXKO00764 312 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 EIF3JO75822 258 aaKnown RBP21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 MYBL2P10244 700 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 KCNA1Q09470 495 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 GPS2Q13227 327 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 CTTNQ14247 550 aaKnown RBP21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 KLHDC7AQ5VTJ3 777 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 CCDC174Q6PII3 467 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 PIGOQ8TEQ8 1089 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 TLR10Q9BXR5 811 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 SMARCAL1Q9NZC9 954 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 ARMCX3Q9UH62 379 aaPredicted RBP21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 ADAM21Q9UKJ8 722 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 HYOU1Q9Y4L1 999 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 A0A087X0T9 212 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 AKAP3O75969 853 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 FAM228BP0C875 321 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 SLC9A1P19634 815 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 BMT2Q1RMZ1 405 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 OTOP1Q7RTM1 612 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 NOX5Q96PH1 765 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 HSD17B14Q9BPX1 270 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 EHD2Q9NZN4 543 aa21.48■■□□□ 1.03
CDC42EP1-201ENST00000249014 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 SFI1A8K8P3 1242 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 MCM3P25205 808 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 UBXN2AP68543 259 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 ENOX2Q16206 610 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 SLC18A3Q16572 532 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 IQCEQ6IPM2 695 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 RINT1Q6NUQ1 792 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 GSPT2Q8IYD1 628 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 RNF10Q8N5U6 811 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZBTB39O15060 712 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 CALUO43852 315 aaPredicted RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 PSMD10O75832 226 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 GCNT3O95395 438 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 TCP1P17987 556 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 CASP4P49662 377 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 KLHL30Q0D2K2 578 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 EZH2Q15910 746 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 CDAN1Q8IWY9 1227 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 MMGT1Q8N4V1 131 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 SUPT20HQ8NEM7 779 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms