RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 HOXD13P35453 343 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
SSPN-201ENST00000242729 MAEAQ7L5Y9 396 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 SPAG5Q96R06 1193 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 NT5C3AQ9H0P0 336 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
SSPN-201ENST00000242729 TARSL2A2RTX5 802 aaKnown RBP18.52■□□□□ 0.55
SSPN-201ENST00000242729 EML1O00423 815 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 GCNT3O95395 438 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 GH2P01242 217 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 NT5C2P49902 561 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 ZC2HC1CQ53FD0 456 aaPredicted RBP18.52■□□□□ 0.55
SSPN-201ENST00000242729 EPB41L5Q9HCM4 733 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 MED4Q9NPJ6 270 aa18.52■□□□□ 0.55
SSPN-201ENST00000242729 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 SPDYE3A6NKU9 549 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 CETN3O15182 167 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 AKAP3O75969 853 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 KRT14P02533 472 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 SERPING1P05155 500 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 GIT2Q14161 759 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
SSPN-201ENST00000242729 ASIC2Q16515 512 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 IQCEQ6IPM2 695 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 ARL8AQ96BM9 186 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 PLIN4Q96Q06 1357 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 GOLGA6CA6NDK9 693 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 GOLGA6DP0CG33 693 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 SPATA31C1P0DKV0 1188 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 ADRA2BP18089 450 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 ECE1P42892 770 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 COG2Q14746 738 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 CCDC174Q6PII3 467 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 TPH2Q8IWU9 490 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 AENQ8WTP8 325 aaKnown RBP18.51■□□□□ 0.55
SSPN-201ENST00000242729 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 GOLGA6AQ9NYA3 693 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 STIM2Q9P246 746 aa18.51■□□□□ 0.55
SSPN-201ENST00000242729 LCA5LO95447 670 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 NDUFB10O96000 172 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 CFBP00751 764 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 TCP1P17987 556 aaKnown RBP18.5■□□□□ 0.55
SSPN-201ENST00000242729 SEMA3FQ13275 785 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
SSPN-201ENST00000242729 ZNF571Q7Z3V5 609 aaPredicted RBP18.5■□□□□ 0.55
SSPN-201ENST00000242729 RDH13Q8NBN7 331 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 SH2D3AQ9BRG2 576 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 AP1M1Q9BXS5 423 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 DNM3Q9UQ16 869 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 KCNK3O14649 394 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 MMP10P09238 476 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 NMT1P30419 496 aaKnown RBP18.5■□□□□ 0.55
SSPN-201ENST00000242729 ATP1A2P50993 1020 aa18.5■□□□□ 0.55
SSPN-201ENST00000242729 ARMCX3Q9UH62 379 aaPredicted RBP18.5■□□□□ 0.55
SSPN-201ENST00000242729 KDM3AQ9Y4C1 1321 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 HEXIM1O94992 359 aaKnown RBP18.49■□□□□ 0.55
SSPN-201ENST00000242729 TUBBP07437 444 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 SPIRE1Q08AE8 756 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 FBXO11Q86XK2 927 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 MMGT1Q8N4V1 131 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 MYO1CO00159 1063 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 MSH4O15457 936 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 GCFC2P16383 781 aaKnown RBP18.49■□□□□ 0.55
SSPN-201ENST00000242729 MCM3P25205 808 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 ETNPPLQ8TBG4 499 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
SSPN-201ENST00000242729 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
SSPN-201ENST00000242729 RRP15Q9Y3B9 282 aaKnown RBP18.49■□□□□ 0.55
SSPN-201ENST00000242729 VGLL3A8MV65 326 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 DDX39AO00148 427 aaKnown RBP18.48■□□□□ 0.55
SSPN-201ENST00000242729 SLC18A3Q16572 532 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 PPP1R18Q6NYC8 613 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 DDX42Q86XP3 938 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSPN-201ENST00000242729 COL23A1Q86Y22 540 aaPredicted RBP18.48■□□□□ 0.55
SSPN-201ENST00000242729 CENPHQ9H3R5 247 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 CLRN2A0PK11 232 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 UCHL3P15374 230 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSPN-201ENST00000242729 ABCB5Q2M3G0 1257 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 CFAP221Q4G0U5 840 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 ADAT2Q7Z6V5 191 aaKnown RBP18.48■□□□□ 0.55
SSPN-201ENST00000242729 LENG9Q96B70 501 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 AMNQ9BXJ7 453 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 TMX4Q9H1E5 349 aaPredicted RBP18.48■□□□□ 0.55
SSPN-201ENST00000242729 GANQ9H2C0 597 aa18.48■□□□□ 0.55
SSPN-201ENST00000242729 TCP10L2B9ZVM9 353 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 CHRNA5P30532 468 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 MYH4Q9Y623 1939 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 SSU72P8A0A1W2PR75 194 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 OPLAHO14841 1288 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 NAB2Q15742 525 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 AOC3Q16853 763 aa18.47■□□□□ 0.55
SSPN-201ENST00000242729 EXOC3L4Q17RC7 722 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms