RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 KRT12Q99456 494 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 RUSC1Q9BVN2 902 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
EFNB3-201ENST00000226091 LAMB1P07942 1786 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 TISP43B9A030 160 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 CETN3O15182 167 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 TLR2O60603 784 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 TRIM49P0CI25 452 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 TRIM49CP0CI26 452 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
EFNB3-201ENST00000226091 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
EFNB3-201ENST00000226091 CCDC88AQ3V6T2 1871 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 KCNK3O14649 394 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 MYL1P05976 194 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
EFNB3-201ENST00000226091 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 MEIS2O14770 477 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 COPB2P35606 906 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 CCDC70Q6NSX1 233 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 SH2D3CQ8N5H7 860 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 SPATA4Q8NEY3 305 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 AMNQ9BXJ7 453 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.18■□□□□ 0.5
EFNB3-201ENST00000226091 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 HPCAL4Q9UM19 191 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 GFPT2O94808 682 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 FGFR1OPO95684 399 aaKnown RBP18.18■□□□□ 0.5
EFNB3-201ENST00000226091 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
EFNB3-201ENST00000226091 SH2D4AQ9H788 454 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 NFU1Q9UMS0 254 aa18.18■□□□□ 0.5
EFNB3-201ENST00000226091 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 TMEM110-MUSTN1A8MSY1 372 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 C8orf74Q6P047 294 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 TRIM58Q8NG06 486 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 DHX36Q9H2U1 1008 aaKnown RBP18.17■□□□□ 0.5
EFNB3-201ENST00000226091 ARMCX3Q9UH62 379 aaPredicted RBP18.17■□□□□ 0.5
EFNB3-201ENST00000226091 TUBBP07437 444 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 ICE2Q659A1 982 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 PDXDC1Q6P996 788 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
EFNB3-201ENST00000226091 DHX37Q8IY37 1157 aaKnown RBP18.17■□□□□ 0.5
EFNB3-201ENST00000226091 NOX5Q96PH1 765 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 BCCIPQ9P287 314 aaKnown RBP eCLIP18.17■□□□□ 0.5
EFNB3-201ENST00000226091 SNX12Q9UMY4 172 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 CEP104O60308 925 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 ZEB2O60315 1214 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 BMP3P12645 472 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 SIAH1Q8IUQ4 282 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 CCDC170Q8IYT3 715 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 RUFY1Q96T51 708 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 EPB41L5Q9HCM4 733 aa18.17■□□□□ 0.5
EFNB3-201ENST00000226091 PTK2Q05397 1052 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 CREG2Q8IUH2 290 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 RETREG2Q8NC44 543 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 BAP1Q92560 729 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 ZC3H4Q9UPT8 1303 aaKnown RBP18.16■□□□□ 0.5
EFNB3-201ENST00000226091 RREB1Q92766 1687 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 H0YIN7 160 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 MSH4O15457 936 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 AKAP3O75969 853 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 FAM13AO94988 1023 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 KRT14P02533 472 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 NPR1P16066 1061 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 ASIC2Q16515 512 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 PHLDB2Q86SQ0 1253 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 SYCP3Q8IZU3 236 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 U2AF1L4Q8WU68 220 aaKnown RBP18.16■□□□□ 0.5
EFNB3-201ENST00000226091 FAM163AQ96GL9 167 aaPredicted RBP18.16■□□□□ 0.5
EFNB3-201ENST00000226091 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
EFNB3-201ENST00000226091 TMEM39BQ9GZU3 492 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 MED4Q9NPJ6 270 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 ZNF277Q9NRM2 450 aaPredicted RBP18.16■□□□□ 0.5
EFNB3-201ENST00000226091 JRKLQ9Y4A0 524 aa18.16■□□□□ 0.5
EFNB3-201ENST00000226091 NOL4O94818 638 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 CKAP4Q07065 602 aaKnown RBP18.15■□□□□ 0.5
EFNB3-201ENST00000226091 PDIA5Q14554 519 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 GOLGA6BA6NDN3 693 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 SYDE2Q5VT97 1194 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 BTAF1O14981 1849 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
EFNB3-201ENST00000226091 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 CARSP49589 748 aaKnown RBP18.15■□□□□ 0.5
EFNB3-201ENST00000226091 LRRC31Q6UY01 552 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 CCNI2Q6ZMN8 369 aaPredicted RBP18.15■□□□□ 0.5
EFNB3-201ENST00000226091 NT5C3AQ9H0P0 336 aa18.15■□□□□ 0.5
EFNB3-201ENST00000226091 CEP350Q5VT06 3117 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms