RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RAET1EQ8TD07 263 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 PARD3BQ8TEW8 1205 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 SLC16A4O15374 487 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF157P51786 506 aaPredicted RBP20■□□□□ 0.79
CLIP2-201ENST00000223398 CDO1Q16878 200 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 PLCB1Q9NQ66 1216 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 PRDM5Q9NQX1 630 aaPredicted RBP20■□□□□ 0.79
CLIP2-201ENST00000223398 CLDN3O15551 220 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 GSTA1P08263 222 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 GSTA2P09210 222 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
CLIP2-201ENST00000223398 NXNQ6DKJ4 435 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ARHGEF37A1IGU5 675 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 CASP1P29466 404 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 GIMAP8Q8ND71 665 aaPredicted RBP19.99■□□□□ 0.79
CLIP2-201ENST00000223398 PPP4R1Q8TF05 950 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 NRKQ7Z2Y5 1582 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 CAMTA2O94983 1202 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 CCNE1P24864 410 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 MAPK6Q16659 721 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 ARMCX2Q7L311 632 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 CROCCP2Q86T23 111 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 NRBP1Q9UHY1 535 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 DPEP1P16444 411 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 ARL4AP40617 200 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 ITPK1Q13572 414 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 TTC30AQ86WT1 665 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 FAM167AQ96KS9 214 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 LY9Q9HBG7 655 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 HACL1Q9UJ83 578 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 PFDN6O15212 129 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 STX2P32856 288 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 ABCD1P33897 745 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 TAF1CQ15572 869 aaPredicted RBP19.99■□□□□ 0.79
CLIP2-201ENST00000223398 WHAMMP3Q1A5X7 153 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF568Q3ZCX4 644 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 SLFN12LQ6IEE8 588 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 DAGLAQ9Y4D2 1042 aa19.99■□□□□ 0.79
CLIP2-201ENST00000223398 NEDD9Q14511 834 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 SFR1Q86XK3 245 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 MRFAP1L1Q96HT8 127 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 TBC1D22BQ9NU19 505 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 RWDD2AQ9UIY3 292 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 GRM4Q14833 912 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 SCN4BQ8IWT1 228 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 GANCQ8TET4 914 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 GGA3Q9NZ52 723 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 ECE1P42892 770 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 CCDC62Q6P9F0 684 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 FASTKD5Q7L8L6 764 aaKnown RBP19.98■□□□□ 0.79
CLIP2-201ENST00000223398 CLEC10AQ8IUN9 316 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 TRIM11Q96F44 468 aa19.98■□□□□ 0.79
CLIP2-201ENST00000223398 POTEB3A0JP26 581 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 POTECB2RU33 542 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 TCP1P17987 556 aaKnown RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 PHKA2P46019 1235 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 PSMD2Q13200 908 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 ARL6IP4Q66PJ3 421 aaKnown RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 POTEBQ6S5H4 581 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 KCTD6Q8NC69 237 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 SURF1Q15526 300 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MUM1L1Q5H9M0 696 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 ARHGEF2Q92974 986 aaKnown RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MAGOHBQ96A72 148 aaKnown RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 CDC27P30260 824 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 STAG2Q8N3U4 1231 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MCUQ8NE86 351 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MCUR1Q96AQ8 359 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 HERC5Q9UII4 1024 aaKnown RBP19.97■□□□□ 0.79
CLIP2-201ENST00000223398 CUL4AQ13619 759 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF667Q5HYK9 610 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 DNAAF3Q8N9W5 541 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 PSMD14O00487 310 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 STRIP1Q5VSL9 837 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MTRQ99707 1265 aa19.97■□□□□ 0.79
CLIP2-201ENST00000223398 MYL1P05976 194 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 KRT76Q01546 638 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 LDHDQ86WU2 507 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 NSUN4Q96CB9 384 aaKnown RBP19.96■□□□□ 0.79
CLIP2-201ENST00000223398 FAM213AQ9BRX8 229 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 IPO11Q9UI26 975 aaKnown RBP19.96■□□□□ 0.79
CLIP2-201ENST00000223398 CYFIP1Q7L576 1253 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 MYLK4Q86YV6 388 aaPredicted RBP19.96■□□□□ 0.79
CLIP2-201ENST00000223398 USP31Q70CQ4 1352 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 MCPH1Q8NEM0 835 aa19.96■□□□□ 0.79
CLIP2-201ENST00000223398 POTEFA5A3E0 1075 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 POC1B-GALNT4F8VUJ3 575 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 PRPSAP2O60256 369 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 ZWINTO95229 277 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 FTCDO95954 541 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 POTEIP0CG38 1075 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 POTEGQ6S5H5 508 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 POTEEQ6S8J3 1075 aa19.95■□□□□ 0.78
CLIP2-201ENST00000223398 PSPC1Q8WXF1 523 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms