RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 KCNH7Q9NS40 1196 aa17.15■□□□□ 0.34
UPK3A-201ENST00000216211 SLC9A2Q9UBY0 812 aa17.15■□□□□ 0.34
UPK3A-201ENST00000216211 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
UPK3A-201ENST00000216211 COL4A6Q14031 1691 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 CPA1P15085 419 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 CDC27P30260 824 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 MGAT3Q09327 533 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 KRT32Q14532 448 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 MARCH8Q5T0T0 291 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 RPAINQ86UA6 219 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 FAM217BQ9NTX9 383 aaPredicted RBP17.14■□□□□ 0.33
UPK3A-201ENST00000216211 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
UPK3A-201ENST00000216211 BRWD1Q9NSI6 2320 aa17.14■□□□□ 0.33
UPK3A-201ENST00000216211 WDR81Q562E7 1941 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 EVPLQ92817 2033 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 FOSP01100 380 aaPredicted RBP17.13■□□□□ 0.33
UPK3A-201ENST00000216211 ARP10275 920 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 TAF2Q6P1X5 1199 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
UPK3A-201ENST00000216211 MYH9P35579 1960 aaKnown RBP17.13■□□□□ 0.33
UPK3A-201ENST00000216211 MBLAC1A4D2B0 266 aaPredicted RBP17.12■□□□□ 0.33
UPK3A-201ENST00000216211 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 INSRRP14616 1297 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
UPK3A-201ENST00000216211 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
UPK3A-201ENST00000216211 ACTR2P61160 394 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
UPK3A-201ENST00000216211 LPIN1Q14693 890 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
UPK3A-201ENST00000216211 SDF4Q9BRK5 362 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 NFASCO94856 1347 aa17.12■□□□□ 0.33
UPK3A-201ENST00000216211 TTC3P53804 2025 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 HMGB1P09429 215 aaKnown RBP17.11■□□□□ 0.33
UPK3A-201ENST00000216211 METAP2P50579 478 aaKnown RBP eCLIP17.11■□□□□ 0.33
UPK3A-201ENST00000216211 FGD1P98174 961 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 Q6ZUG5 572 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 SAMD11Q96NU1 681 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
UPK3A-201ENST00000216211 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
UPK3A-201ENST00000216211 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
UPK3A-201ENST00000216211 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 ZNF76P36508 570 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 SREBF1P36956 1147 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 STAT5BP51692 787 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 RCAN1P53805 252 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
UPK3A-201ENST00000216211 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 FBXO47Q5MNV8 452 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 JAKMIP3Q5VZ66 844 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 TMEM192Q8IY95 271 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 TRAPPC12Q8WVT3 735 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 KCNB2Q92953 911 aa17.1■□□□□ 0.33
UPK3A-201ENST00000216211 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
UPK3A-201ENST00000216211 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
UPK3A-201ENST00000216211 MEIS1O00470 390 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 ENPP3O14638 875 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 ADAMTS3O15072 1205 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 GPM6BQ13491 265 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
UPK3A-201ENST00000216211 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 PLPPR4Q7Z2D5 763 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 BRF1Q92994 677 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
UPK3A-201ENST00000216211 AGO3Q9H9G7 860 aaKnown RBP17.09■□□□□ 0.33
UPK3A-201ENST00000216211 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
UPK3A-201ENST00000216211 H3BNC9 293 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 ATG7O95352 703 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 SCG2P13521 617 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 CD52P31358 61 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
UPK3A-201ENST00000216211 MRPL38Q96DV4 380 aaKnown RBP17.08■□□□□ 0.32
UPK3A-201ENST00000216211 UIMC1Q96RL1 719 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 TRPV2Q9Y5S1 764 aa17.08■□□□□ 0.32
UPK3A-201ENST00000216211 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
UPK3A-201ENST00000216211 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 FAM86B1E9PN63 330 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 CCNE2O96020 404 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 FAM86B2P0C5J1 330 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 HSPA4P34932 840 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 CTNNB1P35222 781 aa17.07■□□□□ 0.32
UPK3A-201ENST00000216211 PTPROQ16827 1216 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms