RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 MAN1A1P33908 653 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 ZNF280CQ8ND82 737 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 SWSAP1Q6NVH7 229 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 SGMS1Q86VZ5 419 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 GABBR1Q9UBS5 961 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 PPP2R2CQ9Y2T4 447 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 VPS41P49754 854 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 MESDQ14696 234 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 WHAMMP3Q1A5X7 153 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 ATP2A3Q93084 1043 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 SFI1A8K8P3 1242 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 H7C0C1 242 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
RGPD5-201ENST00000016946 ATP5OP48047 213 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 PSMC5P62195 406 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
RGPD5-201ENST00000016946 ENOX1Q8TC92 643 aaKnown RBP12.04□□□□□ -0.48
RGPD5-201ENST00000016946 GPT2Q8TD30 523 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 CCDC68Q9H2F9 335 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
RGPD5-201ENST00000016946 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
RGPD5-201ENST00000016946 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
RGPD5-201ENST00000016946 EBAG9O00559 213 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 IPO5O00410 1097 aaKnown RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 DNAJC24Q6P3W2 148 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 DYDC2Q96IM9 177 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 GJB4Q9NTQ9 266 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 INTS8Q75QN2 995 aaKnown RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 OR6B3Q8NGW1 331 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 E9PMD0 336 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 ARL4AP40617 200 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 ZFYVE28Q9HCC9 887 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 KRT12Q99456 494 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 NEXMIFQ5QGS0 1516 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 SCARA5Q6ZMJ2 495 aa12.03□□□□□ -0.48
RGPD5-201ENST00000016946 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 ZNF512BQ96KM6 892 aaPredicted RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 MRPL47Q9HD33 250 aaKnown RBP12.03□□□□□ -0.48
RGPD5-201ENST00000016946 TXNP10599 105 aaKnown RBP12.02□□□□□ -0.48
RGPD5-201ENST00000016946 TKFCQ3LXA3 575 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 SFR1Q86XK3 245 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 C2orf40Q9H1Z8 148 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 MAPK4P31152 587 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 RASSF7Q02833 373 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 FBXO33Q7Z6M2 555 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 RFX6Q8HWS3 928 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 VPS52Q8N1B4 723 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.48
RGPD5-201ENST00000016946 NDUFB10O96000 172 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 CDC27P30260 824 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 PLCB4Q15147 1175 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 ZNF568Q3ZCX4 644 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
RGPD5-201ENST00000016946 MTRQ99707 1265 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 GYS1P13807 737 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 EHHADHQ08426 723 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 BBOF1Q8ND07 529 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.49
RGPD5-201ENST00000016946 CPSF3Q9UKF6 684 aaKnown RBP12.02□□□□□ -0.49
RGPD5-201ENST00000016946 USP11P51784 963 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 KAZNQ674X7 775 aa12.02□□□□□ -0.49
RGPD5-201ENST00000016946 GFPT2O94808 682 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 U2AF2P26368 475 aaKnown RBP eCLIP12.01□□□□□ -0.49
RGPD5-201ENST00000016946 PHBP35232 272 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 CUL4BQ13620 913 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 KRT71Q3SY84 523 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 CEP55Q53EZ4 464 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 GIMAP7Q8NHV1 300 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 GCOM2Q9BZD3 368 aaPredicted RBP12.01□□□□□ -0.49
RGPD5-201ENST00000016946 ABCA6Q8N139 1617 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 ANKRD13AQ8IZ07 590 aa12.01□□□□□ -0.49
RGPD5-201ENST00000016946 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms