RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Evi5P97366 809 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tcp11Q01755 566 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Larp7Q05CL8 570 aaKnown RBP6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Cdcp1Q5U462 833 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Usp17leQ7M764 540 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Trpm4Q7TN37 1213 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Lrsam1Q80ZI6 727 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Armcx3Q8BHS6 379 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Slfnl1Q8BHW9 410 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Frmd4aQ8BIE6 1020 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Vps37aQ8CHS8 397 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tmem221Q8K071 230 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Uba5Q8VE47 403 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Znf24Q91VN1 368 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Apobec3Q99J72 440 aaKnown RBP6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Kif17Q99PW8 1038 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Zbed3Q9D0L1 228 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 MajinQ9D992 256 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 PdclQ9DBX2 301 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Itgb4A2A863 1818 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Pcna-ps2A0A140T8V5 261 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ttll6A4Q9E8 822 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Spata31E9QAF0 1014 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Rad51bO35719 350 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Pcdha4O88689 947 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Mpp3O88910 568 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ptpn12P35831 775 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Edem3Q2HXL6 931 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Spout1Q3UHX9 385 aaKnown RBP6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Cd37Q61470 281 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Kif5bQ61768 963 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nlrp9cQ66X01 1004 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gga2Q6P5E6 603 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Q8BGN9 141 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nup58Q8R332 587 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Mrpl11Q9CQF0 192 aaKnown RBP6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dbndd2Q9CRD4 158 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Lypla2Q9WTL7 231 aa6.85□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dnajc21E9Q8D0 531 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ap1g2O88512 791 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 MybP06876 636 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Mcm5P49718 733 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 ItpripQ3TNL8 555 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dtx3lQ3UIR3 748 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ag2Q3UPL5 249 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ppp2r5eQ61151 467 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Fgfr1opQ66JX5 399 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dusp9Q7TNL7 452 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Mtmr12Q80TA6 747 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Cfap100Q80VN0 613 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Taok3Q8BYC6 898 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Riox2Q8CD15 465 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ttc1Q91Z38 292 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 PccaQ91ZA3 724 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 RpainQ9CWY9 219 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ttll10A4Q9F3 704 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ddx23D3Z0M9 819 aaKnown RBP6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Vmn2r79E9Q067 851 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ppfibp2O35711 882 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Slc12a2P55012 1205 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Chp1P61022 195 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Trim43cP86449 446 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Trim43aQ3TL54 445 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Pdap1Q3UHX2 181 aaKnown RBP6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Irak1Q62406 710 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gigyf2Q6Y7W8 1291 aaKnown RBP6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Naa15Q80UM3 865 aaKnown RBP6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Plcg2Q8CIH5 1265 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tldc1Q8K0P3 455 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 MyripQ8K3I4 856 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Rpap2Q8VC34 614 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Klhl20Q8VCK5 604 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 SyncQ9EPM5 470 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 PyglQ9ET01 850 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 ErmapQ9JLN5 566 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Klra17Q9JMA4 273 aa6.84□□□□□ -1.31
Lig4-202ENSMUST00000170033 Kmt2eQ3UG20 1868 aa6.84□□□□□ -1.32
Lig4-202ENSMUST00000170033 Prss40A6H6T1 365 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Fam129cD3YZB0 591 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Pdzrn4E9PUZ9 1014 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mroh8E9PYI4 1049 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tmem132bF7BAB2 1078 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Kif1cO35071 1100 aaKnown RBP6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Fgd3O88842 733 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Myl3P09542 204 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Clk1P22518 483 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Pdrg1P59048 133 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ncf1Q09014 390 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Atp2b4Q6Q477 1205 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lrrc1Q80VQ1 524 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Trmt2aQ8BNV1 574 aaKnown RBP6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Usp15Q8R5H1 981 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Calml4Q91WQ9 153 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Krt82Q99M74 516 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mrfap1Q9CQL7 125 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mrpl40Q9Z2Q5 206 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Frmpd3A0A140LIW3 1774 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gm3409A0A0G2JE67 319 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 MtrA6H5Y3 1253 aa6.83□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rfpl4bJ3QPR6 266 aa6.83□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms