RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Gm5936A2BG95 728 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm5640A3KG49 728 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cfap70D3YVL2 1141 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zfp213E9QAW0 468 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 CrcpO35427 148 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Chil3O35744 398 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Iqsec3Q3TES0 1195 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Smcr8Q3UMB5 935 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lrrc55Q3UY51 311 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gas8Q60779 478 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gpbp1Q6NXH3 473 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zswim5Q80TC6 1188 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rab44Q8CB87 725 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Taco1Q8K0Z7 294 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Dennd1aQ8K382 1016 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pcdh18Q8VHR0 1134 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rev1Q920Q2 1249 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rnf138rt1Q9D9M9 248 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rwdd2aQ9D9S3 292 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 IcoslgQ9JHJ8 322 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Edf1Q9JMG1 148 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pex3Q9QXY9 372 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Syde2E9PUP1 1314 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 March10E9PX79 788 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pex5O09012 639 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Kcna3P16390 528 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Nlrx1Q3TL44 975 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Uts2bQ765I1 113 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Bola2Q8BGS2 86 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Trim68Q8K243 485 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Bud13Q8R149 637 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pspc1Q8R326 523 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rbm43Q99J64 343 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gimap4Q99JY3 219 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Hao1Q9WU19 370 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pnpla6Q3TRM4 1355 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Slfn9B1ARD6 910 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rap1gds1E9Q912 607 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Flot1O08917 428 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mucl2P02815 138 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pon1P52430 355 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Trim43cP86449 446 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Serping1P97290 504 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tbc1d2bQ3U0J8 965 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ell2Q3UKU1 639 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Otop3Q80UF9 577 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rbm19Q8R3C6 952 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Setd6Q9CWY3 473 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ppil4Q9CXG3 492 aaKnown RBP8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 IkbipQ9DBZ1 373 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Stard3nlQ9DCI3 235 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Itgb1bp2Q9R000 350 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ror2Q9Z138 944 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sel1lQ9Z2G6 790 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Krt27Q9Z320 448 aa8.26□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Dip2bQ3UH60 1574 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Casq2O09161 415 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Hmgb1P63158 215 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 DSCC1Q14AI0 399 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mphosph8Q3TYA6 858 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Palb2Q3U0P1 1104 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pnma5Q5DTT8 618 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Klra7Q60654 280 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rimbp2Q80U40 1072 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tmem120aQ8C1E7 343 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 4921504E06RikQ8CET2 560 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ushbp1Q8R370 680 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pdxdc1Q99K01 787 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ino80bQ99PT3 375 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Luc7lQ9CYI4 371 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tomm20lQ9D4V6 152 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cabp5Q9JLK3 173 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Akap8lQ9R0L7 642 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Col16a1Q8BLX7 1580 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Usp51B1AY15 661 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm1141B9EJU1 475 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm10220K7N660 267 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 TyrobpO54885 114 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Atp9aO70228 1047 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Myl3P09542 204 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lig1P37913 916 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Man1a2P39098 641 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 TbcaP48428 108 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Atp4aQ64436 1033 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fam160b2Q80YR2 744 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Psd4Q8BLR5 1005 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zkscan8Q8BSL0 588 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ldlrap1Q8C142 308 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccdc28bQ8CEG5 200 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sirt1Q923E4 737 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Q99KU6 348 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cmtr1Q9DBC3 837 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 PlekQ9JHK5 350 aaKnown RBP8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 AtrnQ9WU60 1428 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Patl2A2ARM1 529 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mmrn1B2RPV6 1210 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm3264L7N2C5 238 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fam71e2L7N480 754 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Unc5cO08747 931 aa8.25□□□□□ -1.09
Bdnf-209ENSMUST00000111050 ClppO88696 272 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms