RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ncapg2Q6DFV1 1138 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cep70Q6IQY5 616 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mettl25Q6NXH8 597 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rad54bQ6PFE3 886 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Dhx33Q80VY9 698 aaKnown RBP10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Clic6Q8BHB9 596 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Kcnv1Q8BZN2 503 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Terb1Q8C0V1 768 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Snx30Q8CE50 437 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Olfr809Q8VEX8 328 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Zfp617Q91WM0 559 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Dnajc9Q91WN1 259 aaKnown RBP10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mis18aQ9CZJ6 204 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 IscuQ9D7P6 168 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cyp2j7A0A140T8U1 504 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ifit3bE9PV48 403 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Stag2O35638 1231 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cetn3O35648 167 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tp53P02340 387 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 AgtP11859 477 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 GzmgP13366 248 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ncam1P13595 1115 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 TwistnbQ78WZ7 330 aaKnown RBP10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Dzip3Q7TPV2 1204 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Alkbh8Q80Y20 664 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Caps2Q8BUG5 550 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rabep2Q91WG2 554 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Zfand2bQ91X58 257 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Nde1Q9CZA6 344 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Sapcd2Q9D818 391 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rsph3bQ9DA80 389 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Osbpl9A2A8Z1 736 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 NuggcD3YWJ0 796 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tekt5G5E8A8 557 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 E2f6O54917 272 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 ChkbO55229 394 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gdap1O88741 358 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pabpn1lQ5XFR0 273 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Grb10Q60760 621 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ankrd13aQ80UP5 588 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 B3glctQ8BHT6 489 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tmem62Q8BXJ9 643 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lrrc8cQ8R502 803 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Klc3Q91W40 508 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Socs4Q91ZA6 436 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Neurl2Q9D0S4 285 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 IqcdQ9D3V1 458 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Prl2a1Q9JHK0 228 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ercc4Q9QZD4 917 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Krt71Q9R0H5 524 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tjp2Q9Z0U1 1167 aaKnown RBP10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 NalcnQ8BXR5 1738 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Itsn1Q9Z0R4 1714 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Map3k19E9Q3S4 1311 aa10.54□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Chd4Q6PDQ2 1915 aaKnown RBP10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Hoxa2P31245 372 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rpl5P47962 297 aaKnown RBP10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Kcnc2Q14B80 642 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Arid3aQ62431 601 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 RragbQ6NTA4 374 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Miga2Q8BK03 593 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lars2Q8VDC0 902 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 NsmfQ99NF2 532 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Nsmce3Q9CPR8 279 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ccdc105Q9D4K7 499 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Stk32bQ9JJX8 414 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 AuhQ9JLZ3 314 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 IqccA2ADZ8 418 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 C7D3YXF5 845 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 R3hdm1E9Q9Q2 1135 aaKnown RBP10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mx1P09922 631 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Hoxa10P31310 416 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Crhr1P35347 415 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Dnajc5P60904 198 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Kiaa1468Q148V7 1216 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Csrnp2Q8BGQ2 534 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Klhl7Q8BUL5 586 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Slc13a4Q8BZ82 625 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Sec63Q8VHE0 760 aaKnown RBP10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Nt5c1bQ91YE9 573 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 IydQ9DCX8 285 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 FignQ9ERZ6 759 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lemd3Q9WU40 921 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm13941A2AJ38 245 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lcn6A2AJB9 181 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cylc2B1AWN8 422 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm3636E9Q5P1 227 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pip4k2aO70172 405 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ets1P27577 440 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gsta3P30115 221 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Sar1aP36536 198 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 LtbrP50284 415 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rnf216P58283 853 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gdf3Q07104 366 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 StimateQ3UF25 288 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lrch2Q3UMG5 773 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Zdhhc18Q5Y5T2 380 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Usp49Q6P9L4 685 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Usp8Q80U87 1080 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms