RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Mageb16Q9CWV4 363 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 SfnO70456 248 aaKnown RBP13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Lrch2Q3UMG5 773 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Kiaa0391Q8JZY4 584 aaKnown RBP13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Zcchc18Q8VD24 393 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Tmem192Q9CXT7 266 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Adamts13Q769J6 1426 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Kiaa1210E9Q0C6 1637 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Arhgap6O54834 987 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Cdh15P33146 784 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Krt32Q62168 407 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Zcchc17Q9ESX4 241 aaKnown RBP13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ltb4r2Q9JJL9 360 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Grin2dQ03391 1323 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Trim5E9PV98 497 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Tpp1O89023 562 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 TfrcQ62351 763 aaKnown RBP13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Slc4a7Q8BTY2 1034 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Bzw1Q9CQC6 419 aaKnown RBP13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Snx1Q9WV80 522 aa13.25□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ttc38A3KMP2 465 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 S100a5P63084 93 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Arhgap17Q3UIA2 846 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Pla2g4cQ64GA5 597 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Klhl14Q69ZK5 630 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Cul4bA2A432 970 aaKnown RBP13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Irx1P81068 480 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Mettl17Q3U2U7 461 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Otop3Q80UF9 577 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 4930449I24RikQ9D5E3 319 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Rmdn1Q9DCV4 305 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Akt3Q9WUA6 479 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Rreb1Q3UH06 1700 aaKnown RBP13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 ErmardE9Q048 622 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Pla2g4bP0C871 782 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Casp2P29594 452 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Hps5P59438 1126 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Il17raQ60943 864 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Hoxa13Q62424 386 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ces1eQ64176 562 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Q66JV7 365 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 C2cd5Q7TPS5 1016 aaKnown RBP13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Kcng1A2BDX4 514 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Clcn6O35454 870 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 RcvrnP34057 202 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Setd4P58467 439 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Nt5c2Q3V1L4 560 aa13.24□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Znf541Q0GGX2 1363 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Gimap9G3X987 291 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Celf1P28659 486 aaKnown RBP13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Actn1Q7TPR4 892 aaKnown RBP13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ppm1mQ8BU27 406 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Abhd8Q8R0P8 439 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 PccaQ91ZA3 724 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Cdc26Q99JP4 85 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 NhsB1AV60 1647 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ttc13A0A1L1SSC7 844 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Gm21962L7N280 338 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 MybP06876 636 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ptk2P34152 1090 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 ItkQ03526 625 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 P3h4Q8K2B0 443 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 MbipQ99LQ1 341 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 PycardQ9EPB4 193 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Rbp7Q9EPC5 134 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Caln1Q9JJG7 219 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Krt26Q3TRJ4 462 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 PapolaQ61183 739 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ttc26Q8BS45 554 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Pspc1Q8R326 523 aaKnown RBP13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Rfc4Q99J62 364 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Tlr3Q99MB1 905 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Vps33aQ9D2N9 598 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Prdm2A2A7B5 1709 aaKnown RBP13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ino80Q6ZPV2 1559 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Trappc11B2RXC1 1133 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Serpina1aP07758 413 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Serpina1bP22599 413 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Serpina1cQ00896 412 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Serpina1dQ00897 413 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Eepd1Q3TGW2 569 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Mylk3Q3UIZ8 795 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 CrkQ64010 304 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Tlr13Q6R5N8 991 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Sept9Q80UG5 583 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Atg16l1Q8C0J2 607 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Stxbp5Q8K400 1152 aaKnown RBP13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ccdc65Q8VHI7 493 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Pomgnt1Q91X88 660 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 PdhbQ9D051 359 aa13.23□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Clrn2B2RVW2 232 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Grem2O88273 168 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Fkbp1aP26883 108 aaKnown RBP13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Lrig2Q52KR2 1054 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Rpf1Q7TND5 349 aaKnown RBP13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Smim5Q8BT42 78 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Klhl11Q8CE33 709 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Cnot8Q9D8X5 292 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 Ccdc182Q9D9C6 152 aa13.22□□□□□ -0.29
Ldb3-201ENSMUST00000022327 IydQ9DCX8 285 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms