RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W DIA4P38705 446 aaPredicted RBP1.88□□□□□ -2.11
HER1YOR227W YHR045WP38775 560 aa1.88□□□□□ -2.11
HER1YOR227W CCT2P39076 527 aaKnown RBP1.88□□□□□ -2.11
HER1YOR227W PRM9P39551 298 aa1.88□□□□□ -2.11
HER1YOR227W IDS2P46958 469 aa1.88□□□□□ -2.11
HER1YOR227W MSE1P48525 536 aa1.88□□□□□ -2.11
HER1YOR227W BRO1P48582 844 aa1.88□□□□□ -2.11
HER1YOR227W TOS2P50078 622 aa1.88□□□□□ -2.11
HER1YOR227W PMT5P52867 743 aa1.88□□□□□ -2.11
HER1YOR227W ARI1P53111 347 aaKnown RBP1.88□□□□□ -2.11
HER1YOR227W YGR126WP53274 230 aa1.88□□□□□ -2.11
HER1YOR227W MPP6P53725 186 aaPredicted RBP1.88□□□□□ -2.11
HER1YOR227W PRM1P53835 661 aa1.88□□□□□ -2.11
HER1YOR227W PGA2P53903 129 aa1.88□□□□□ -2.11
HER1YOR227W YPL014WQ02606 381 aa1.88□□□□□ -2.11
HER1YOR227W MFM1Q02783 413 aa1.88□□□□□ -2.11
HER1YOR227W URH1Q04179 340 aa1.88□□□□□ -2.11
HER1YOR227W SSQ1Q05931 657 aaPredicted RBP1.88□□□□□ -2.11
HER1YOR227W YDL057WQ07379 328 aa1.88□□□□□ -2.11
HER1YOR227W AEP3Q12089 606 aa1.88□□□□□ -2.11
HER1YOR227W YDR061WQ12298 539 aa1.88□□□□□ -2.11
HER1YOR227W PGK1P00560 416 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W AI1P03875 834 aa1.87□□□□□ -2.11
HER1YOR227W GAL10P04397 699 aa1.87□□□□□ -2.11
HER1YOR227W PEP4P07267 405 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W PUT2P07275 575 aa1.87□□□□□ -2.11
HER1YOR227W VPS1P21576 704 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W STE11P23561 717 aa1.87□□□□□ -2.11
HER1YOR227W BMH1P29311 267 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W SUA5P32579 426 aa1.87□□□□□ -2.11
HER1YOR227W DUG2P38149 878 aa1.87□□□□□ -2.11
HER1YOR227W MMS21P38632 267 aa1.87□□□□□ -2.11
HER1YOR227W YHL026CP38740 315 aa1.87□□□□□ -2.11
HER1YOR227W PET100P38958 111 aa1.87□□□□□ -2.11
HER1YOR227W FHL1P39521 936 aa1.87□□□□□ -2.11
HER1YOR227W ERG10P41338 398 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W ATG27P46989 271 aa1.87□□□□□ -2.11
HER1YOR227W URB2P47108 1174 aa1.87□□□□□ -2.11
HER1YOR227W TRF5P48561 642 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W YGL108CP53139 140 aa1.87□□□□□ -2.11
HER1YOR227W COX18P53239 316 aa1.87□□□□□ -2.11
HER1YOR227W PET117Q02771 107 aa1.87□□□□□ -2.11
HER1YOR227W ENT5Q03769 411 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W RTN1Q04947 295 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W BCP1Q06338 283 aa1.87□□□□□ -2.11
HER1YOR227W MLH3Q12083 715 aa1.87□□□□□ -2.11
HER1YOR227W LYS21Q12122 440 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W TDH3P00359 332 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
HER1YOR227W KIN2P13186 1147 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W ADE1P27616 306 aa1.87□□□□□ -2.11
HER1YOR227W MVD1P32377 396 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W RAD23P32628 398 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W YSC83P32792 385 aa1.87□□□□□ -2.11
HER1YOR227W SPP381P38282 291 aaPredicted RBP1.87□□□□□ -2.11
HER1YOR227W PIH1P38768 344 aa1.87□□□□□ -2.11
HER1YOR227W RTC3P38804 111 aaPredicted RBP1.87□□□□□ -2.11
HER1YOR227W ECM10P39987 644 aa1.87□□□□□ -2.11
HER1YOR227W SLM1P40485 686 aa1.87□□□□□ -2.11
HER1YOR227W LIA1P47120 325 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W AZR1P50080 613 aa1.87□□□□□ -2.11
HER1YOR227W RTC4P53850 401 aa1.87□□□□□ -2.11
HER1YOR227W SKI8Q02793 397 aaPredicted RBP1.87□□□□□ -2.11
HER1YOR227W RRB1Q04225 511 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W BUD22Q04347 519 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W CTS2Q06350 511 aa1.87□□□□□ -2.11
HER1YOR227W SLK19Q08581 821 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W MTR10Q99189 972 aa1.87□□□□□ -2.11
HER1YOR227W FRS2P15625 503 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W FUS3P16892 353 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W STE4P18851 423 aa1.87□□□□□ -2.11
HER1YOR227W FPR1P20081 114 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W YCP4P25349 247 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W ZIP1P31111 875 aa1.87□□□□□ -2.11
HER1YOR227W AIM26P32858 118 aa1.87□□□□□ -2.11
HER1YOR227W CUE2P36075 443 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W TIF5P38431 405 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W CBR1P38626 284 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W UIP3P39547 235 aa1.87□□□□□ -2.11
HER1YOR227W BUR6P40096 142 aa1.87□□□□□ -2.11
HER1YOR227W YPS6P40583 537 aa1.87□□□□□ -2.11
HER1YOR227W MPS3P47069 682 aa1.87□□□□□ -2.11
HER1YOR227W ROG1P53118 685 aa1.87□□□□□ -2.11
HER1YOR227W EFM5P53200 248 aaKnown RBP1.87□□□□□ -2.11
HER1YOR227W YMR130WQ04223 302 aa1.87□□□□□ -2.11
HER1YOR227W DCS1Q06151 350 aa1.87□□□□□ -2.11
HER1YOR227W BSP1Q06604 576 aa1.87□□□□□ -2.11
HER1YOR227W YPL216WQ08964 1102 aa1.87□□□□□ -2.11
HER1YOR227W BAG7Q12128 409 aa1.87□□□□□ -2.11
HER1YOR227W INP53Q12271 1107 aa1.87□□□□□ -2.11
HER1YOR227W RNH203Q12338 110 aa1.87□□□□□ -2.11
HER1YOR227W RMD5Q12508 421 aa1.87□□□□□ -2.11
HER1YOR227W YCL012CQ8J0M4 134 aa1.87□□□□□ -2.11
HER1YOR227W CYC1P00044 109 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W SIR3P06701 978 aa1.86□□□□□ -2.11
HER1YOR227W NFT1P0CE68 1218 aa1.86□□□□□ -2.11
HER1YOR227W MATALPHA1P0CY06 175 aa1.86□□□□□ -2.11
HER1YOR227W HMLALPHA1P0CY07 175 aa1.86□□□□□ -2.11
HER1YOR227W SEC12P11655 471 aa1.86□□□□□ -2.11
HER1YOR227W HXT2P23585 541 aa1.86□□□□□ -2.11
HER1YOR227W ADY2P25613 283 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms