RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	VPS25	P47142	202 aa		4.38	□□□□□ -1.71
BDP1	YNL039W	GTO1	P48239	356 aa		4.38	□□□□□ -1.71
BDP1	YNL039W	ATP23	P53722	227 aa		4.38	□□□□□ -1.71
BDP1	YNL039W	MPP6	P53725	186 aa	Predicted RBP	4.38	□□□□□ -1.71
BDP1	YNL039W	DBP6	P53734	629 aa	Known RBP	4.38	□□□□□ -1.71
BDP1	YNL039W	RRG8	Q06109	277 aa		4.38	□□□□□ -1.71
BDP1	YNL039W	ARP6	Q12509	438 aa		4.38	□□□□□ -1.71
BDP1	YNL039W	TDH1	P00360	332 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	OPI3	P05375	206 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	SAR1	P20606	190 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	URE2	P23202	354 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	SLM5	P25345	492 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	MSK1	P32048	576 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	PRP39	P39682	629 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
BDP1	YNL039W	HMS2	P47175	358 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	PMT5	P52867	743 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	RET3	P53600	189 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	MMT1	Q03218	510 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	RUD3	Q12234	484 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	GLE1	Q12315	538 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	YDR262W	Q12331	272 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	DCP1	Q12517	231 aa	Predicted RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	OSH3	P38713	996 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	ISC1	P40015	477 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	CSM2	P40465	213 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	LAM5	P43560	674 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	EMC2	P47133	292 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	MND1	P53102	219 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	YNL234W	P53857	426 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	MPS1	P54199	764 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	IRC10	Q08118	586 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	GEP3	Q08622	556 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	LDB17	Q12342	491 aa		4.37	□□□□□ -1.71
BDP1	YNL039W	AIM45	Q12480	344 aa	Known RBP	4.37	□□□□□ -1.71
BDP1	YNL039W	SSA3	P09435	649 aa	Known RBP	4.36	□□□□□ -1.71
BDP1	YNL039W	RPT5	P33297	434 aa	Known RBP	4.36	□□□□□ -1.71
BDP1	YNL039W	SKN1	P33336	771 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	TPO5	P36029	618 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	YIP1	P53039	248 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	YGL185C	P53100	379 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	PNG1	Q02890	363 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	SEG1	Q04279	960 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	CSI1	Q04368	295 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	APC4	Q04601	652 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	BNA5	Q05979	453 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	MRPL35	Q06678	367 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	SYO1	Q07395	620 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	NRT1	Q08485	598 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	SKI7	Q08491	747 aa	Predicted RBP	4.36	□□□□□ -1.71
BDP1	YNL039W	SPO24	Q3E752	67 aa		4.36	□□□□□ -1.71
BDP1	YNL039W	MSS116	P15424	664 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	EXO70	P19658	623 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	DBR1	P24309	405 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	MGR1	P25573	417 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	ADY2	P25613	283 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	ACH1	P32316	526 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	YPS1	P32329	569 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	RIM2	P38127	377 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	SLI1	P53304	468 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	SAM50	P53969	484 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	THI20	Q08224	551 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	YLR112W	Q12130	139 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	ORT1	Q12375	292 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	FSH3	Q99369	266 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	YLL053C	P0CD98	152 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	ARF1	P11076	181 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	UNG1	P12887	359 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	YCL068C	P25593	260 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	FRE1	P32791	686 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	COT1	P32798	439 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	BUD2	P33314	1104 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
BDP1	YNL039W	SPC34	P36131	295 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	RTC2	P38279	296 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	PET100	P38958	111 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	LYS1	P38998	373 aa	RIP-Chip data	4.35	□□□□□ -1.71	RIP-Chip
BDP1	YNL039W	LCP5	P40079	357 aa	Predicted RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	MMF1	P40185	145 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	CDC40	P40968	455 aa	Predicted RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	LOH1	P47055	219 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	LIA1	P47120	325 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	LSB1	P53281	241 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	LSC1	P53598	329 aa	Known RBP	4.35	□□□□□ -1.71
BDP1	YNL039W	ATC1	Q04005	294 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	LDS2	Q08218	356 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	SGT1	Q08446	395 aa		4.35	□□□□□ -1.71
BDP1	YNL039W	RNA1	P11745	407 aa	Known RBP	4.34	□□□□□ -1.71
BDP1	YNL039W	PRP16	P15938	1071 aa	Predicted RBP	4.34	□□□□□ -1.71
BDP1	YNL039W	MEK1	P24719	497 aa	Predicted RBP	4.34	□□□□□ -1.71
BDP1	YNL039W	PDR3	P33200	976 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	YCR041W	P37265	110 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	YPK3	P38070	525 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	STE24	P47154	453 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	YDL186W	P48568	277 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	IDP3	P53982	420 aa	Known RBP	4.34	□□□□□ -1.71
BDP1	YNL039W	RSN1	Q03516	953 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	AIM33	Q04516	312 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	ARV1	Q06541	321 aa		4.34	□□□□□ -1.71
BDP1	YNL039W	APC5	Q08683	685 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms