RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YCR051WP25631 222 aa0.83□□□□□ -2.28
RKR1YMR247C MCM10P32354 571 aa0.83□□□□□ -2.28
RKR1YMR247C MUD1P32605 298 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C MTC6P38849 526 aa0.83□□□□□ -2.28
RKR1YMR247C PTH1P38876 190 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C SMF1P38925 575 aa0.83□□□□□ -2.28
RKR1YMR247C YFR057WP43625 151 aa0.83□□□□□ -2.28
RKR1YMR247C YGR149WP48236 432 aa0.83□□□□□ -2.28
RKR1YMR247C RPA49Q01080 415 aaPredicted RBP0.83□□□□□ -2.28
RKR1YMR247C IZH1Q03419 316 aa0.83□□□□□ -2.28
RKR1YMR247C BET5Q03630 159 aa0.83□□□□□ -2.28
RKR1YMR247C MDM36Q06820 579 aa0.83□□□□□ -2.28
RKR1YMR247C SHS1Q07657 551 aa0.83□□□□□ -2.28
RKR1YMR247C YOL075CQ08234 1294 aa0.83□□□□□ -2.28
RKR1YMR247C RRG1Q12167 365 aaPredicted RBP0.83□□□□□ -2.28
RKR1YMR247C YGK3Q12222 375 aaPredicted RBP0.83□□□□□ -2.28
RKR1YMR247C CTF3Q12748 733 aa0.83□□□□□ -2.28
RKR1YMR247C MPD2Q99316 277 aa0.83□□□□□ -2.28
RKR1YMR247C RKR1Q04781 1562 aa0.83□□□□□ -2.28
RKR1YMR247C EDE1P34216 1381 aa0.83□□□□□ -2.28
RKR1YMR247C NFT1P0CE68 1218 aa0.83□□□□□ -2.28
RKR1YMR247C MDH1P17505 334 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
RKR1YMR247C RVS161P25343 265 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C YME2P32843 850 aa0.83□□□□□ -2.28
RKR1YMR247C MRP4P32902 394 aa0.83□□□□□ -2.28
RKR1YMR247C FAA2P39518 744 aa0.83□□□□□ -2.28
RKR1YMR247C MBB1P39534 108 aa0.83□□□□□ -2.28
RKR1YMR247C HAC1P41546 238 aa0.83□□□□□ -2.28
RKR1YMR247C POP1P41812 875 aa0.83□□□□□ -2.28
RKR1YMR247C FYV8P46949 817 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C MPP10P47083 593 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C YIP1P53039 248 aa0.83□□□□□ -2.28
RKR1YMR247C GMC1Q04399 608 aa0.83□□□□□ -2.28
RKR1YMR247C RGC1Q06108 1083 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C BSC1Q12140 328 aa0.83□□□□□ -2.28
RKR1YMR247C NCE102Q12207 173 aaRIP-Chip data0.83□□□□□ -2.28not detected
RKR1YMR247C FRE7Q12333 620 aa0.83□□□□□ -2.28
RKR1YMR247C TY4B-JP47024 1803 aa0.83□□□□□ -2.28
RKR1YMR247C STF1P01098 86 aa0.83□□□□□ -2.28
RKR1YMR247C HSP26P15992 214 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28 RIP-Chip
RKR1YMR247C APA1P16550 321 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C CLN1P20437 546 aa0.83□□□□□ -2.28
RKR1YMR247C ISY1P21374 235 aaPredicted RBP0.83□□□□□ -2.28
RKR1YMR247C DCC1P25559 380 aa0.83□□□□□ -2.28
RKR1YMR247C GLC7P32598 312 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C YEL045CP32616 141 aa0.83□□□□□ -2.28
RKR1YMR247C CSE2P33308 149 aa0.83□□□□□ -2.28
RKR1YMR247C LOS1P33418 1100 aaPredicted RBP0.83□□□□□ -2.28
RKR1YMR247C DOA1P36037 715 aa0.83□□□□□ -2.28
RKR1YMR247C AVT5P38176 459 aa0.83□□□□□ -2.28
RKR1YMR247C OM14P38325 134 aa0.83□□□□□ -2.28
RKR1YMR247C GAT2P40209 560 aa0.83□□□□□ -2.28
RKR1YMR247C RSM25P40496 264 aa0.83□□□□□ -2.28
RKR1YMR247C GAB1P41733 394 aa0.83□□□□□ -2.28
RKR1YMR247C SSU1P41930 458 aa0.83□□□□□ -2.28
RKR1YMR247C LOH1P47055 219 aa0.83□□□□□ -2.28
RKR1YMR247C ASN2P49090 572 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C KEL2P50090 882 aa0.83□□□□□ -2.28
RKR1YMR247C PIB2P53191 635 aa0.83□□□□□ -2.28
RKR1YMR247C ZPR1P53303 486 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C RSM23Q01163 450 aa0.83□□□□□ -2.28
RKR1YMR247C BSC6Q08280 497 aa0.83□□□□□ -2.28
RKR1YMR247C NRT1Q08485 598 aa0.83□□□□□ -2.28
RKR1YMR247C FDH1Q08911 376 aa0.83□□□□□ -2.28
RKR1YMR247C SFM1Q12314 213 aa0.83□□□□□ -2.28
RKR1YMR247C PDR15Q04182 1529 aaKnown RBP0.83□□□□□ -2.28
RKR1YMR247C YML133CQ03099 1374 aa0.82□□□□□ -2.28
RKR1YMR247C YLL067CQ07888 1374 aa0.82□□□□□ -2.28
RKR1YMR247C YLL066CQ99208 1374 aa0.82□□□□□ -2.28
RKR1YMR247C TPI1P00942 248 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C ADE4P04046 510 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C PET123P17558 318 aa0.82□□□□□ -2.28
RKR1YMR247C YCK1P23291 538 aa0.82□□□□□ -2.28
RKR1YMR247C AAT2P23542 418 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C RNA14P25298 677 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C CTR86P25355 563 aa0.82□□□□□ -2.28
RKR1YMR247C SNT1P25357 1226 aa0.82□□□□□ -2.28
RKR1YMR247C FUN19P28003 413 aaPredicted RBP0.82□□□□□ -2.28
RKR1YMR247C ITR2P30606 609 aa0.82□□□□□ -2.28
RKR1YMR247C GPI10P30777 616 aa0.82□□□□□ -2.28
RKR1YMR247C NAT2P37293 288 aa0.82□□□□□ -2.28
RKR1YMR247C MAL33P38157 468 aa0.82□□□□□ -2.28
RKR1YMR247C TCM62P38228 572 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C SDS24P38314 527 aa0.82□□□□□ -2.28
RKR1YMR247C VHS2P40463 436 aa0.82□□□□□ -2.28
RKR1YMR247C YIL029CP40538 142 aa0.82□□□□□ -2.28
RKR1YMR247C YIR035CP40579 254 aa0.82□□□□□ -2.28
RKR1YMR247C AZF1P41696 914 aa0.82□□□□□ -2.28
RKR1YMR247C YJR120WP47157 116 aa0.82□□□□□ -2.28
RKR1YMR247C MST27P53176 234 aa0.82□□□□□ -2.28
RKR1YMR247C YGR117CP53270 476 aa0.82□□□□□ -2.28
RKR1YMR247C RTT102P53330 157 aa0.82□□□□□ -2.28
RKR1YMR247C RHO5P53879 331 aaKnown RBP0.82□□□□□ -2.28
RKR1YMR247C TAP42Q04372 366 aa0.82□□□□□ -2.28
RKR1YMR247C YIL002W-AQ3E7Z5 69 aa0.82□□□□□ -2.28
RKR1YMR247C SIN3P22579 1536 aa0.82□□□□□ -2.28
RKR1YMR247C TY4B-HP0C2J7 1802 aa0.82□□□□□ -2.28
RKR1YMR247C ASP3-2P0CX77 362 aa0.82□□□□□ -2.28
RKR1YMR247C ASP3-3P0CX78 362 aa0.82□□□□□ -2.28
RKR1YMR247C ASP3-4P0CX79 362 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms