RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W XYL2Q07993 356 aa9.43□□□□□ -0.9
SHH4YLR164W MCA1Q08601 432 aa9.43□□□□□ -0.9
SHH4YLR164W PIN2Q12057 282 aa9.43□□□□□ -0.9
SHH4YLR164W TAF3Q12297 353 aa9.43□□□□□ -0.9
SHH4YLR164W YDL199CQ12407 687 aa9.43□□□□□ -0.9
SHH4YLR164W PNO1Q99216 274 aaKnown RBP9.43□□□□□ -0.9
SHH4YLR164W YCR006CP25350 157 aa9.42□□□□□ -0.9
SHH4YLR164W ARE1P25628 610 aa9.42□□□□□ -0.9
SHH4YLR164W TAH1P25638 111 aaPredicted RBP9.42□□□□□ -0.9
SHH4YLR164W TUL1P36096 758 aa9.42□□□□□ -0.9
SHH4YLR164W STE24P47154 453 aa9.42□□□□□ -0.9
SHH4YLR164W PAC10P48363 199 aa9.42□□□□□ -0.9
SHH4YLR164W HOS2P53096 452 aaPredicted RBP9.42□□□□□ -0.9
SHH4YLR164W NRM1P53718 249 aa9.42□□□□□ -0.9
SHH4YLR164W SED5Q01590 340 aa9.42□□□□□ -0.9
SHH4YLR164W OAZ1Q02803 292 aa9.42□□□□□ -0.9
SHH4YLR164W DTD1Q07648 150 aaKnown RBP9.42□□□□□ -0.9
SHH4YLR164W DCI1Q08558 271 aa9.42□□□□□ -0.9
SHH4YLR164W BSC1Q12140 328 aa9.42□□□□□ -0.9
SHH4YLR164W SKS1Q12505 502 aa9.42□□□□□ -0.9
SHH4YLR164W MDM12Q92328 271 aa9.42□□□□□ -0.9
SHH4YLR164W SLH1P53327 1967 aaKnown RBP9.42□□□□□ -0.9
SHH4YLR164W RHO1P06780 209 aaKnown RBP9.41□□□□□ -0.9
SHH4YLR164W RPP1BP10622 106 aaKnown RBP9.41□□□□□ -0.9
SHH4YLR164W MXR2P25566 168 aa9.41□□□□□ -0.9
SHH4YLR164W UBC8P28263 218 aa9.41□□□□□ -0.9
SHH4YLR164W MDJ1P35191 511 aa9.41□□□□□ -0.9
SHH4YLR164W DOA1P36037 715 aa9.41□□□□□ -0.9
SHH4YLR164W AUR1P36107 401 aaPredicted RBP9.41□□□□□ -0.9
SHH4YLR164W SPC34P36131 295 aa9.41□□□□□ -0.9
SHH4YLR164W ALK1P43633 760 aaKnown RBP9.41□□□□□ -0.9
SHH4YLR164W ATF2P53296 535 aa9.41□□□□□ -0.9
SHH4YLR164W YNL181WP53878 407 aa9.41□□□□□ -0.9
SHH4YLR164W YDR239CQ03780 787 aa9.41□□□□□ -0.9
SHH4YLR164W ISR1Q06098 443 aaKnown RBP9.41□□□□□ -0.9
SHH4YLR164W HTS1P07263 546 aaKnown RBP9.4□□□□□ -0.9
SHH4YLR164W ATR1P13090 542 aa9.4□□□□□ -0.9
SHH4YLR164W POL4P25615 582 aa9.4□□□□□ -0.9
SHH4YLR164W PTP2P29461 750 aa9.4□□□□□ -0.9
SHH4YLR164W HOG1P32485 435 aa9.4□□□□□ -0.9
SHH4YLR164W YGR250CP53316 781 aaKnown RBP9.4□□□□□ -0.9
SHH4YLR164W DCP2P53550 970 aaKnown RBP9.4□□□□□ -0.9
SHH4YLR164W YMR099CQ03161 297 aaKnown RBP9.4□□□□□ -0.9
SHH4YLR164W YMR310CQ04867 317 aaPredicted RBP9.4□□□□□ -0.9
SHH4YLR164W GIC2Q06648 383 aa9.4□□□□□ -0.9
SHH4YLR164W YPR097WQ06839 1073 aa9.4□□□□□ -0.9
SHH4YLR164W LOT6Q07923 191 aa9.4□□□□□ -0.9
SHH4YLR164W LEU9Q12166 604 aaKnown RBP9.4□□□□□ -0.9
SHH4YLR164W SKM1Q12469 655 aa9.4□□□□□ -0.9
SHH4YLR164W YOL159C-AQ3E769 90 aa9.4□□□□□ -0.9
SHH4YLR164W MF(ALPHA)1P01149 165 aa9.39□□□□□ -0.91
SHH4YLR164W PUT2P07275 575 aa9.39□□□□□ -0.91
SHH4YLR164W IMG1P25626 169 aa9.39□□□□□ -0.91
SHH4YLR164W YMC1P32331 307 aa9.39□□□□□ -0.91
SHH4YLR164W PTR2P32901 601 aa9.39□□□□□ -0.91
SHH4YLR164W OAR1P35731 278 aa9.39□□□□□ -0.91
SHH4YLR164W YHL012WP38709 493 aa9.39□□□□□ -0.91
SHH4YLR164W PTC2P39966 464 aaKnown RBP9.39□□□□□ -0.91
SHH4YLR164W ARI1P53111 347 aaKnown RBP9.39□□□□□ -0.91
SHH4YLR164W BNI4P53858 892 aa9.39□□□□□ -0.91
SHH4YLR164W SPO77Q06134 477 aa9.39□□□□□ -0.91
SHH4YLR164W YLR030WQ07967 263 aa9.39□□□□□ -0.91
SHH4YLR164W YOL036WQ08206 761 aa9.39□□□□□ -0.91
SHH4YLR164W BSC6Q08280 497 aa9.39□□□□□ -0.91
SHH4YLR164W MMP1Q12372 583 aa9.39□□□□□ -0.91
SHH4YLR164W CBS2P14905 389 aa9.38□□□□□ -0.91
SHH4YLR164W RPS1BP23248 255 aaKnown RBP9.38□□□□□ -0.91
SHH4YLR164W CTR86P25355 563 aa9.38□□□□□ -0.91
SHH4YLR164W CDC12P32468 407 aaKnown RBP9.38□□□□□ -0.91
SHH4YLR164W SRB5P32585 307 aa9.38□□□□□ -0.91
SHH4YLR164W GDH2P33327 1092 aaKnown RBP9.38□□□□□ -0.91
SHH4YLR164W ZTA1P38230 334 aaKnown RBP9.38□□□□□ -0.91
SHH4YLR164W ATG14P38270 344 aa9.38□□□□□ -0.91
SHH4YLR164W FMP52P40008 231 aa9.38□□□□□ -0.91
SHH4YLR164W PUS7Q08647 676 aaKnown RBP9.38□□□□□ -0.91
SHH4YLR164W YOR019WQ99248 730 aa9.38□□□□□ -0.91
SHH4YLR164W CLB3P24870 427 aa9.37□□□□□ -0.91
SHH4YLR164W SAC1P32368 623 aaKnown RBP9.37□□□□□ -0.91
SHH4YLR164W APE2P32454 952 aaKnown RBP9.37□□□□□ -0.91
SHH4YLR164W YRO2P38079 344 aa9.37□□□□□ -0.91
SHH4YLR164W YBR238CP38330 731 aaKnown RBP9.37□□□□□ -0.91
SHH4YLR164W YIL152WP40455 235 aa9.37□□□□□ -0.91
SHH4YLR164W YRB2P40517 327 aa9.37□□□□□ -0.91
SHH4YLR164W GVP36P40531 326 aaKnown RBP9.37□□□□□ -0.91
SHH4YLR164W CAK1P43568 368 aaPredicted RBP9.37□□□□□ -0.91
SHH4YLR164W DUG1P43616 481 aaKnown RBP9.37□□□□□ -0.91
SHH4YLR164W UBC9P50623 157 aaPredicted RBP9.37□□□□□ -0.91
SHH4YLR164W RRN11Q04712 507 aa9.37□□□□□ -0.91
SHH4YLR164W DIC1Q06143 298 aa9.37□□□□□ -0.91
SHH4YLR164W YLR456WQ06199 204 aa9.37□□□□□ -0.91
SHH4YLR164W RRT8Q08219 342 aa9.37□□□□□ -0.91
SHH4YLR164W YLR126CQ12288 251 aa9.37□□□□□ -0.91
SHH4YLR164W GLO4Q12320 285 aa9.37□□□□□ -0.91
SHH4YLR164W ZWF1P11412 505 aaKnown RBP9.36□□□□□ -0.91
SHH4YLR164W GRR1P24814 1151 aa9.36□□□□□ -0.91
SHH4YLR164W CYS4P32582 507 aaKnown RBP9.36□□□□□ -0.91
SHH4YLR164W PET112P33893 541 aa9.36□□□□□ -0.91
SHH4YLR164W RPS27AP35997 82 aaKnown RBP9.36□□□□□ -0.91
SHH4YLR164W AHP1P38013 176 aaKnown RBP9.36□□□□□ -0.91
SHH4YLR164W RPS27BP38711 82 aa9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms