RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C VHC1P38329 1120 aa3.05□□□□□ -1.92
SDO1YLR022C DED81P38707 554 aaKnown RBP3.05□□□□□ -1.92
SDO1YLR022C MSR1P38714 643 aa3.05□□□□□ -1.92
SDO1YLR022C SPT8P38915 602 aa3.05□□□□□ -1.92
SDO1YLR022C AXL2P38928 823 aa3.05□□□□□ -1.92
SDO1YLR022C EDC3P39998 551 aaKnown RBP3.05□□□□□ -1.92
SDO1YLR022C NOP16P40007 231 aaKnown RBP3.05□□□□□ -1.92
SDO1YLR022C VRG4P40107 337 aa3.05□□□□□ -1.92
SDO1YLR022C MKT1P40850 830 aaKnown RBP3.05□□□□□ -1.92
SDO1YLR022C PMT4P46971 762 aa3.05□□□□□ -1.92
SDO1YLR022C MEP3P53390 489 aa3.05□□□□□ -1.92
SDO1YLR022C YNL181WP53878 407 aa3.05□□□□□ -1.92
SDO1YLR022C YNL143CP53908 130 aa3.05□□□□□ -1.92
SDO1YLR022C KTR6P54070 446 aa3.05□□□□□ -1.92
SDO1YLR022C RCF1Q03713 159 aa3.05□□□□□ -1.92
SDO1YLR022C FMP42Q04991 504 aa3.05□□□□□ -1.92
SDO1YLR022C THI20Q08224 551 aa3.05□□□□□ -1.92
SDO1YLR022C SCM3Q12334 223 aa3.05□□□□□ -1.92
SDO1YLR022C STT4P37297 1900 aa3.05□□□□□ -1.92
SDO1YLR022C CHO1P08456 276 aa3.04□□□□□ -1.92
SDO1YLR022C HOM3P10869 527 aa3.04□□□□□ -1.92
SDO1YLR022C SPO16P17122 198 aa3.04□□□□□ -1.92
SDO1YLR022C MET16P18408 261 aaPredicted RBP3.04□□□□□ -1.92
SDO1YLR022C CLB4P24871 460 aa3.04□□□□□ -1.92
SDO1YLR022C CMK1P27466 446 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C MSP1P28737 362 aa3.04□□□□□ -1.92
SDO1YLR022C KAR9P32526 644 aa3.04□□□□□ -1.92
SDO1YLR022C NTR2P36118 322 aaPredicted RBP3.04□□□□□ -1.92
SDO1YLR022C KAP104P38217 918 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C ASN2P49090 572 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C HOS2P53096 452 aaPredicted RBP3.04□□□□□ -1.92
SDO1YLR022C DRN1P53255 507 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C RBG2P53295 368 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C RHO3Q00245 231 aaKnown RBP3.04□□□□□ -1.92
SDO1YLR022C PPM1Q04081 328 aa3.04□□□□□ -1.92
SDO1YLR022C EMI1Q04406 187 aa3.04□□□□□ -1.92
SDO1YLR022C FAR10Q06001 478 aa3.04□□□□□ -1.92
SDO1YLR022C TCO89Q08921 799 aa3.04□□□□□ -1.92
SDO1YLR022C COX17Q12287 69 aa3.04□□□□□ -1.92
SDO1YLR022C PET111P08468 800 aa3.03□□□□□ -1.92
SDO1YLR022C FUR1P18562 216 aaKnown RBP3.03□□□□□ -1.92
SDO1YLR022C KRE6P32486 720 aa3.03□□□□□ -1.92
SDO1YLR022C BZZ1P38822 633 aa3.03□□□□□ -1.92
SDO1YLR022C DHH1P39517 506 aaKnown RBP3.03□□□□□ -1.92
SDO1YLR022C YIL086CP40503 102 aa3.03□□□□□ -1.92
SDO1YLR022C SNG1P46950 547 aa3.03□□□□□ -1.92
SDO1YLR022C PIL1P53252 339 aaKnown RBP3.03□□□□□ -1.92
SDO1YLR022C BSC5P53755 489 aa3.03□□□□□ -1.92
SDO1YLR022C IPI3P53877 555 aa3.03□□□□□ -1.92
SDO1YLR022C INA17Q02888 182 aa3.03□□□□□ -1.92
SDO1YLR022C CIA1Q05583 330 aa3.03□□□□□ -1.92
SDO1YLR022C YLR287CQ05881 355 aa3.03□□□□□ -1.92
SDO1YLR022C UTP21Q06078 939 aaPredicted RBP3.03□□□□□ -1.92
SDO1YLR022C AKR2Q12013 749 aa3.03□□□□□ -1.92
SDO1YLR022C YOR338WQ99326 363 aa3.03□□□□□ -1.92
SDO1YLR022C ATP2P00830 511 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C SCH9P11792 824 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C NOP1P15646 327 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C NCP1P16603 691 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C HNM1P19807 563 aa3.02□□□□□ -1.93
SDO1YLR022C CLB2P24869 491 aa3.02□□□□□ -1.93
SDO1YLR022C YCL049CP25577 312 aa3.02□□□□□ -1.93
SDO1YLR022C CAB3P36076 571 aa3.02□□□□□ -1.93
SDO1YLR022C FMP46P36141 133 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C MRPL37P36532 105 aa3.02□□□□□ -1.93
SDO1YLR022C IML3P38265 245 aa3.02□□□□□ -1.93
SDO1YLR022C STN1P38960 494 aa3.02□□□□□ -1.93
SDO1YLR022C PRM9P39551 298 aa3.02□□□□□ -1.93
SDO1YLR022C YEL075CP39972 122 aa3.02□□□□□ -1.93
SDO1YLR022C MRX1P40050 688 aa3.02□□□□□ -1.93
SDO1YLR022C CTK2P46962 323 aa3.02□□□□□ -1.93
SDO1YLR022C MRPL19P53875 158 aa3.02□□□□□ -1.93
SDO1YLR022C ARP10Q04549 284 aa3.02□□□□□ -1.93
SDO1YLR022C RTT103Q05543 409 aa3.02□□□□□ -1.93
SDO1YLR022C KAP95Q06142 861 aaKnown RBP3.02□□□□□ -1.93
SDO1YLR022C CRN1Q06440 651 aa3.02□□□□□ -1.93
SDO1YLR022C TEN1Q07921 160 aa3.02□□□□□ -1.93
SDO1YLR022C TPO4Q12256 659 aa3.02□□□□□ -1.93
SDO1YLR022C EMP46Q12396 444 aa3.02□□□□□ -1.93
SDO1YLR022C SEM1O94742 89 aa3.01□□□□□ -1.93
SDO1YLR022C EPT1P22140 391 aa3.01□□□□□ -1.93
SDO1YLR022C SAN1P22470 610 aa3.01□□□□□ -1.93
SDO1YLR022C UBA1P22515 1024 aaKnown RBP3.01□□□□□ -1.93
SDO1YLR022C DAL2P25335 343 aa3.01□□□□□ -1.93
SDO1YLR022C MGR1P25573 417 aa3.01□□□□□ -1.93
SDO1YLR022C YIM1P28625 365 aa3.01□□□□□ -1.93
SDO1YLR022C SEC1P30619 724 aaKnown RBP3.01□□□□□ -1.93
SDO1YLR022C NPL6P32832 435 aa3.01□□□□□ -1.93
SDO1YLR022C SRB2P34162 210 aa3.01□□□□□ -1.93
SDO1YLR022C ALY1P36117 915 aa3.01□□□□□ -1.93
SDO1YLR022C YPK3P38070 525 aa3.01□□□□□ -1.93
SDO1YLR022C YHR182WP38870 785 aa3.01□□□□□ -1.93
SDO1YLR022C CYC2P38909 366 aa3.01□□□□□ -1.93
SDO1YLR022C SEC31P38968 1273 aaKnown RBP3.01□□□□□ -1.93
SDO1YLR022C YEL057CP39983 233 aa3.01□□□□□ -1.93
SDO1YLR022C SWP82P43554 623 aa3.01□□□□□ -1.93
SDO1YLR022C TOS3P43637 560 aa3.01□□□□□ -1.93
SDO1YLR022C SIP4P46954 829 aa3.01□□□□□ -1.93
SDO1YLR022C PEX31P53203 462 aa3.01□□□□□ -1.93
SDO1YLR022C MEH1Q02205 184 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms