RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C DST1P07273 309 aa2.12□□□□□ -2.07
UBP11YKR098C SPO12P17123 173 aa2.12□□□□□ -2.07
UBP11YKR098C TIP1P27654 210 aaPredicted RBP2.12□□□□□ -2.07
UBP11YKR098C NDC1P32500 655 aa2.12□□□□□ -2.07
UBP11YKR098C GLC7P32598 312 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C RGT1P32862 1170 aa2.12□□□□□ -2.07
UBP11YKR098C PTR2P32901 601 aa2.12□□□□□ -2.07
UBP11YKR098C KAP104P38217 918 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C YHR177WP38867 453 aa2.12□□□□□ -2.07
UBP11YKR098C MET30P39014 640 aa2.12□□□□□ -2.07
UBP11YKR098C DHH1P39517 506 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C SHO1P40073 367 aa2.12□□□□□ -2.07
UBP11YKR098C YIL169CP40442 995 aa2.12□□□□□ -2.07
UBP11YKR098C GPI8P49018 411 aa2.12□□□□□ -2.07
UBP11YKR098C PHB2P50085 310 aa2.12□□□□□ -2.07
UBP11YKR098C AVT4P50944 713 aa2.12□□□□□ -2.07
UBP11YKR098C ADA2Q02336 434 aa2.12□□□□□ -2.07
UBP11YKR098C MGR3Q04472 501 aa2.12□□□□□ -2.07
UBP11YKR098C ECM7Q06200 448 aa2.12□□□□□ -2.07
UBP11YKR098C NOP6Q07623 225 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C SRL1Q08673 210 aa2.12□□□□□ -2.07
UBP11YKR098C ARG4P04076 463 aaPredicted RBP2.12□□□□□ -2.07
UBP11YKR098C RPL12AP0CX53 165 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C RPL12BP0CX54 165 aa2.12□□□□□ -2.07
UBP11YKR098C PRP16P15938 1071 aaPredicted RBP2.12□□□□□ -2.07
UBP11YKR098C CDC23P16522 626 aa2.12□□□□□ -2.07
UBP11YKR098C SEC1P30619 724 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C MTC4P38335 694 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C OSW5P40219 148 aa2.12□□□□□ -2.07
UBP11YKR098C RTT101P47050 842 aa2.12□□□□□ -2.07
UBP11YKR098C PMT5P52867 743 aa2.12□□□□□ -2.07
UBP11YKR098C MPS2P53159 387 aa2.12□□□□□ -2.07
UBP11YKR098C RTT102P53330 157 aa2.12□□□□□ -2.07
UBP11YKR098C STD1Q02794 444 aa2.12□□□□□ -2.07
UBP11YKR098C MRP51Q02950 344 aa2.12□□□□□ -2.07
UBP11YKR098C MMT1Q03218 510 aa2.12□□□□□ -2.07
UBP11YKR098C NUP53Q03790 475 aa2.12□□□□□ -2.07
UBP11YKR098C URC2Q04411 772 aa2.12□□□□□ -2.07
UBP11YKR098C RRP9Q06506 573 aaKnown RBP2.12□□□□□ -2.07
UBP11YKR098C TIM18Q08749 192 aa2.12□□□□□ -2.07
UBP11YKR098C SRL2Q12020 392 aa2.12□□□□□ -2.07
UBP11YKR098C TEF1P02994 458 aaKnown RBP2.11□□□□□ -2.07
UBP11YKR098C PSO2P30620 661 aa2.11□□□□□ -2.07
UBP11YKR098C ATS1P31386 333 aa2.11□□□□□ -2.07
UBP11YKR098C SUR1P33300 382 aa2.11□□□□□ -2.07
UBP11YKR098C SRB2P34162 210 aa2.11□□□□□ -2.07
UBP11YKR098C YKL097CP34245 136 aa2.11□□□□□ -2.07
UBP11YKR098C MST28P39552 234 aa2.11□□□□□ -2.07
UBP11YKR098C MPS1P54199 764 aa2.11□□□□□ -2.07
UBP11YKR098C PRP3Q03338 469 aaPredicted RBP2.11□□□□□ -2.07
UBP11YKR098C RTC5Q12108 567 aaKnown RBP2.11□□□□□ -2.07
UBP11YKR098C OPI3P05375 206 aa2.1□□□□□ -2.07
UBP11YKR098C MTF1P14908 341 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C SAG1P20840 650 aa2.1□□□□□ -2.07
UBP11YKR098C SKN1P33336 771 aa2.1□□□□□ -2.07
UBP11YKR098C PTK1P36002 662 aaPredicted RBP2.1□□□□□ -2.07
UBP11YKR098C PCH2P38126 564 aa2.1□□□□□ -2.07
UBP11YKR098C BZZ1P38822 633 aa2.1□□□□□ -2.07
UBP11YKR098C MEP1P40260 492 aa2.1□□□□□ -2.07
UBP11YKR098C RPR2P40571 144 aa2.1□□□□□ -2.07
UBP11YKR098C POP6P53218 158 aa2.1□□□□□ -2.07
UBP11YKR098C PIR3Q03180 325 aa2.1□□□□□ -2.07
UBP11YKR098C BET5Q03630 159 aa2.1□□□□□ -2.07
UBP11YKR098C AYT1Q12226 474 aa2.1□□□□□ -2.07
UBP11YKR098C PKH2Q12236 1081 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C YOR012WQ12351 137 aa2.1□□□□□ -2.07
UBP11YKR098C RPL15AP05748 204 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C SAM1P10659 382 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C ATR1P13090 542 aa2.1□□□□□ -2.07
UBP11YKR098C SAM2P19358 384 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C LOS1P33418 1100 aaPredicted RBP2.1□□□□□ -2.07
UBP11YKR098C PMU1P36069 295 aa2.1□□□□□ -2.07
UBP11YKR098C YBR056WP38081 501 aa2.1□□□□□ -2.07
UBP11YKR098C YDR089WP38966 869 aa2.1□□□□□ -2.07
UBP11YKR098C ALG8P40351 577 aa2.1□□□□□ -2.07
UBP11YKR098C LAM5P43560 674 aa2.1□□□□□ -2.07
UBP11YKR098C STE24P47154 453 aa2.1□□□□□ -2.07
UBP11YKR098C SSN8P47821 323 aa2.1□□□□□ -2.07
UBP11YKR098C TOS2P50078 622 aa2.1□□□□□ -2.07
UBP11YKR098C PRM1P53835 661 aa2.1□□□□□ -2.07
UBP11YKR098C RRB1Q04225 511 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C ERP1Q05359 219 aaKnown RBP2.1□□□□□ -2.07
UBP11YKR098C YAP7Q08182 245 aa2.1□□□□□ -2.07
UBP11YKR098C AAD15Q08361 143 aa2.1□□□□□ -2.07
UBP11YKR098C MDY2Q12285 212 aa2.1□□□□□ -2.07
UBP11YKR098C RNA14P25298 677 aaKnown RBP2.09□□□□□ -2.07
UBP11YKR098C YBL028CP38202 106 aa2.09□□□□□ -2.07
UBP11YKR098C MMF1P40185 145 aaKnown RBP2.09□□□□□ -2.07
UBP11YKR098C PCL7P40186 285 aa2.09□□□□□ -2.07
UBP11YKR098C SIM1P40472 476 aa2.09□□□□□ -2.07
UBP11YKR098C YPL068CQ02749 293 aa2.09□□□□□ -2.07
UBP11YKR098C SMA2Q04658 369 aa2.09□□□□□ -2.07
UBP11YKR098C YPR078CQ06813 372 aa2.09□□□□□ -2.07
UBP11YKR098C MUM3Q08750 479 aa2.09□□□□□ -2.07
UBP11YKR098C YPL199CQ08954 240 aa2.09□□□□□ -2.07
UBP11YKR098C DAP1Q12091 152 aa2.09□□□□□ -2.07
UBP11YKR098C RGT2Q12300 763 aa2.09□□□□□ -2.07
UBP11YKR098C HEM2P05373 342 aa2.09□□□□□ -2.08
UBP11YKR098C RPL20AP0CX23 172 aaKnown RBP2.09□□□□□ -2.08
UBP11YKR098C RPL20BP0CX24 172 aaPredicted RBP2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms