RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W YMR147WP40218 223 aaKnown RBP3.93□□□□□ -1.78
MSN4YKL062W CDC40P40968 455 aaPredicted RBP3.93□□□□□ -1.78
MSN4YKL062W FMP33P46998 180 aa3.93□□□□□ -1.78
MSN4YKL062W ASN2P49090 572 aaKnown RBP3.93□□□□□ -1.78
MSN4YKL062W ROG1P53118 685 aa3.93□□□□□ -1.78
MSN4YKL062W YGR079WP53249 370 aa3.93□□□□□ -1.78
MSN4YKL062W BNA7Q04066 261 aa3.93□□□□□ -1.78
MSN4YKL062W PLM2Q04383 521 aa3.93□□□□□ -1.78
MSN4YKL062W MYO5Q04439 1219 aaKnown RBP3.93□□□□□ -1.78
MSN4YKL062W COX20Q04935 205 aa3.93□□□□□ -1.78
MSN4YKL062W PDR8Q06149 701 aa3.93□□□□□ -1.78
MSN4YKL062W IPK1Q06667 281 aa3.93□□□□□ -1.78
MSN4YKL062W BTS1Q12051 335 aa3.93□□□□□ -1.78
MSN4YKL062W PKH2Q12236 1081 aaKnown RBP3.93□□□□□ -1.78
MSN4YKL062W PMR1P13586 950 aa3.92□□□□□ -1.78
MSN4YKL062W HXT2P23585 541 aa3.92□□□□□ -1.78
MSN4YKL062W PUP3P25451 205 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W PTC6P25646 442 aa3.92□□□□□ -1.78
MSN4YKL062W ECT1P33412 323 aa3.92□□□□□ -1.78
MSN4YKL062W KAP104P38217 918 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W RTT107P38850 1070 aa3.92□□□□□ -1.78
MSN4YKL062W ALP1P38971 573 aa3.92□□□□□ -1.78
MSN4YKL062W SAP1P39955 897 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W GLG2P47011 380 aa3.92□□□□□ -1.78
MSN4YKL062W DPB11P47027 764 aaPredicted RBP3.92□□□□□ -1.78
MSN4YKL062W BNA3P47039 444 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W UBX6P47049 396 aa3.92□□□□□ -1.78
MSN4YKL062W KTR5P53966 522 aaPredicted RBP3.92□□□□□ -1.78
MSN4YKL062W AAT1Q01802 451 aa3.92□□□□□ -1.78
MSN4YKL062W COQ9Q05779 260 aa3.92□□□□□ -1.78
MSN4YKL062W YBR255C-AQ3E776 120 aa3.92□□□□□ -1.78
MSN4YKL062W PUT2P07275 575 aa3.92□□□□□ -1.78
MSN4YKL062W RPL31BP0C2H9 113 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W TCP1P12612 559 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W PTP1P25044 335 aa3.92□□□□□ -1.78
MSN4YKL062W ICL1P28240 557 aaPredicted RBP3.92□□□□□ -1.78
MSN4YKL062W PSO2P30620 661 aa3.92□□□□□ -1.78
MSN4YKL062W ATP11P32453 318 aa3.92□□□□□ -1.78
MSN4YKL062W GSH1P32477 678 aa3.92□□□□□ -1.78
MSN4YKL062W PAD1P33751 242 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
MSN4YKL062W RSM22P36056 628 aa3.92□□□□□ -1.78
MSN4YKL062W AIM29P36154 155 aa3.92□□□□□ -1.78
MSN4YKL062W SBE22P38814 852 aa3.92□□□□□ -1.78
MSN4YKL062W GPI16P38875 610 aa3.92□□□□□ -1.78
MSN4YKL062W YHR210CP38893 341 aa3.92□□□□□ -1.78
MSN4YKL062W MIG2P53035 382 aa3.92□□□□□ -1.78
MSN4YKL062W CUS2P53830 285 aaPredicted RBP3.92□□□□□ -1.78
MSN4YKL062W YDR541CQ03049 344 aa3.92□□□□□ -1.78
MSN4YKL062W IVY1Q04934 453 aa3.92□□□□□ -1.78
MSN4YKL062W YLR283WQ05867 314 aa3.92□□□□□ -1.78
MSN4YKL062W ATG26Q06321 1198 aa3.92□□□□□ -1.78
MSN4YKL062W CMS1Q07897 291 aaKnown RBP3.92□□□□□ -1.78
MSN4YKL062W YOR029WQ12243 111 aa3.92□□□□□ -1.78
MSN4YKL062W RAD9P14737 1309 aa3.91□□□□□ -1.78
MSN4YKL062W THR4P16120 514 aaKnown RBP3.91□□□□□ -1.78
MSN4YKL062W SRP54P20424 541 aaKnown RBP3.91□□□□□ -1.78
MSN4YKL062W PDE1P22434 369 aa3.91□□□□□ -1.78
MSN4YKL062W PBN1P25580 416 aa3.91□□□□□ -1.78
MSN4YKL062W CIN8P27895 1000 aa3.91□□□□□ -1.78
MSN4YKL062W YKL071WP36086 256 aa3.91□□□□□ -1.78
MSN4YKL062W NTR2P36118 322 aaPredicted RBP3.91□□□□□ -1.78
MSN4YKL062W RPF2P36160 344 aaKnown RBP3.91□□□□□ -1.78
MSN4YKL062W ARA1P38115 344 aa3.91□□□□□ -1.78
MSN4YKL062W SPP381P38282 291 aaPredicted RBP3.91□□□□□ -1.78
MSN4YKL062W HIT1P46973 164 aa3.91□□□□□ -1.78
MSN4YKL062W LOH1P47055 219 aa3.91□□□□□ -1.78
MSN4YKL062W YNL260CP53846 198 aa3.91□□□□□ -1.78
MSN4YKL062W TPO3Q06451 622 aa3.91□□□□□ -1.78
MSN4YKL062W MRPL35Q06678 367 aa3.91□□□□□ -1.78
MSN4YKL062W SNA4Q07549 140 aa3.91□□□□□ -1.78
MSN4YKL062W YOL159CQ08300 171 aa3.91□□□□□ -1.78
MSN4YKL062W ABP140Q08641 628 aaKnown RBP3.91□□□□□ -1.78
MSN4YKL062W SRO7Q12038 1033 aa3.91□□□□□ -1.78
MSN4YKL062W YLR111WQ12528 110 aa3.91□□□□□ -1.78
MSN4YKL062W MET16P18408 261 aaPredicted RBP3.9□□□□□ -1.78
MSN4YKL062W COQ1P18900 473 aa3.9□□□□□ -1.78
MSN4YKL062W URE2P23202 354 aaKnown RBP3.9□□□□□ -1.78
MSN4YKL062W IMG1P25626 169 aa3.9□□□□□ -1.78
MSN4YKL062W DIA4P38705 446 aaPredicted RBP3.9□□□□□ -1.78
MSN4YKL062W YHR177WP38867 453 aa3.9□□□□□ -1.78
MSN4YKL062W PCL6P40038 420 aa3.9□□□□□ -1.78
MSN4YKL062W ERG10P41338 398 aaKnown RBP3.9□□□□□ -1.78
MSN4YKL062W SNO3P43544 222 aa3.9□□□□□ -1.78
MSN4YKL062W YAR1P46683 200 aa3.9□□□□□ -1.78
MSN4YKL062W ZPR1P53303 486 aaKnown RBP3.9□□□□□ -1.78
MSN4YKL062W NOP13P53883 403 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
MSN4YKL062W YNL146WP53906 100 aa3.9□□□□□ -1.78
MSN4YKL062W EAF7P53911 425 aaKnown RBP3.9□□□□□ -1.78
MSN4YKL062W DIA1P54005 336 aa3.9□□□□□ -1.78
MSN4YKL062W PIG1Q06216 648 aa3.9□□□□□ -1.78
MSN4YKL062W POS5Q06892 414 aa3.9□□□□□ -1.78
MSN4YKL062W RAX1Q08760 435 aa3.9□□□□□ -1.78
MSN4YKL062W ATG9Q12142 997 aa3.9□□□□□ -1.78
MSN4YKL062W SPO24Q3E752 67 aa3.9□□□□□ -1.78
MSN4YKL062W COX2P00410 251 aa3.9□□□□□ -1.79
MSN4YKL062W RAD3P06839 778 aa3.9□□□□□ -1.79
MSN4YKL062W YAK1P14680 807 aa3.9□□□□□ -1.79
MSN4YKL062W ZRC1P20107 442 aa3.9□□□□□ -1.79
MSN4YKL062W RPS5P26783 225 aaKnown RBP3.9□□□□□ -1.79
MSN4YKL062W RPC25P35718 212 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms