RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	GLO2	Q05584	274 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	STE23	Q06010	1027 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	BCP1	Q06338	283 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	TPO3	Q06451	622 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	SYO1	Q07395	620 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YDL218W	Q07629	317 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YDR262W	Q12331	272 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	LDB17	Q12342	491 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YLL053C	P0CD98	152 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	ARF1	P11076	181 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	RPB4	P20433	221 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	ICL1	P28240	557 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	YMC1	P32331	307 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	RPC25	P35718	212 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	TPO5	P36029	618 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	DOA1	P36037	715 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	RIM2	P38127	377 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	RTC2	P38279	296 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	DED81	P38707	554 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	MMF1	P40185	145 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	GCD14	P46959	383 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	RIB4	P50861	169 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	YGL082W	P53155	381 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	CGR1	P53188	120 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	DRN1	P53255	507 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	DBP6	P53734	629 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	EAF7	P53911	425 aa	Known RBP	4.11	□□□□□ -1.75
VMA22	YHR060W	YPL014W	Q02606	381 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	MRP51	Q02950	344 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	URC2	Q04411	772 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	YLR173W	Q06247	608 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	SGT1	Q08446	395 aa		4.11	□□□□□ -1.75
VMA22	YHR060W	RNA1	P11745	407 aa	Known RBP	4.1	□□□□□ -1.75
VMA22	YHR060W	UNG1	P12887	359 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	RSR1	P13856	272 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	MSS116	P15424	664 aa	Known RBP	4.1	□□□□□ -1.75
VMA22	YHR060W	CDC23	P16522	626 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	VPS3	P23643	1011 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	YCR007C	P25354	239 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	MNS1	P32906	549 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	FLO10	P36170	1169 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	YEL020C	P39994	560 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	YMR134W	P40207	237 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	RET3	P53600	189 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	YNL260C	P53846	198 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	STD1	Q02794	444 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	RBD2	Q12270	262 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	ARP6	Q12509	438 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	FSH3	Q99369	266 aa		4.1	□□□□□ -1.75
VMA22	YHR060W	RPL12A	P0CX53	165 aa	Known RBP	4.09	□□□□□ -1.75
VMA22	YHR060W	RPL12B	P0CX54	165 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	SPO11	P23179	398 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	YPS1	P32329	569 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	COX13	P32799	129 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	SKN1	P33336	771 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
VMA22	YHR060W	RSM22	P36056	628 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	RCY1	P39531	840 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	LYS12	P40495	371 aa	Known RBP	4.09	□□□□□ -1.75
VMA22	YHR060W	IRC7	P43623	340 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	HMS2	P47175	358 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	PNG1	Q02890	363 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	BOP2	Q06150	570 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	RNH203	Q12338	110 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	YOR012W	Q12351	137 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	EDE1	P34216	1381 aa		4.09	□□□□□ -1.75
VMA22	YHR060W	MAS2	P11914	482 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	CLN3	P13365	580 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	PET123	P17558	318 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	MEK1	P24719	497 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	YKT6	P36015	200 aa	Known RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	YBR056W	P38081	501 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	PAC2	P39937	518 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	UTP25	P40498	721 aa	Known RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	HXT9	P40885	567 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	CDC40	P40968	455 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	TOS3	P43637	560 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	KEL2	P50090	882 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	YNL234W	P53857	426 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	YNL050C	P53952	270 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	GPI15	P53961	229 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	KTR5	P53966	522 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	MPS1	P54199	764 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	CAC2	Q04199	468 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	YMR087W	Q04299	284 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	ATG38	Q05789	226 aa	Known RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	ECM7	Q06200	448 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	GPN3	Q06543	272 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	LDS2	Q08218	356 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	SKI7	Q08491	747 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA22	YHR060W	SPO24	Q3E752	67 aa		4.08	□□□□□ -1.76
VMA22	YHR060W	CHD1	P32657	1468 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	QCR6	P00127	147 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	CAR2	P07991	424 aa	Known RBP	4.07	□□□□□ -1.76
VMA22	YHR060W	YAR066W	P0CX18	203 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	YHR214W	P0CX19	203 aa		4.07	□□□□□ -1.76
VMA22	YHR060W	PRP16	P15938	1071 aa	Predicted RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms