RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W POX1P13711 748 aa5.66□□□□□ -1.5
SKN1YGR143W EMC1P25574 760 aa5.66□□□□□ -1.5
SKN1YGR143W DEG1P31115 442 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W DGR2P32330 852 aa5.66□□□□□ -1.5
SKN1YGR143W HYM1P32464 399 aa5.66□□□□□ -1.5
SKN1YGR143W SNU114P36048 1008 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W FLR1P38124 548 aa5.66□□□□□ -1.5
SKN1YGR143W GIP4P39732 760 aa5.66□□□□□ -1.5
SKN1YGR143W PFA3P42836 336 aa5.66□□□□□ -1.5
SKN1YGR143W YTP1P53584 459 aa5.66□□□□□ -1.5
SKN1YGR143W NOG2P53742 486 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W REG1Q00816 1014 aa5.66□□□□□ -1.5
SKN1YGR143W YPL080CQ02826 108 aa5.66□□□□□ -1.5
SKN1YGR143W TPP1Q03796 238 aa5.66□□□□□ -1.5
SKN1YGR143W YDR109CQ04585 715 aa5.66□□□□□ -1.5
SKN1YGR143W CDC123Q05791 360 aa5.66□□□□□ -1.5
SKN1YGR143W BCP1Q06338 283 aa5.66□□□□□ -1.5
SKN1YGR143W STB3Q12427 513 aa5.66□□□□□ -1.5
SKN1YGR143W YPR014CQ6B0W2 109 aa5.66□□□□□ -1.5
SKN1YGR143W RGS2Q99188 309 aa5.66□□□□□ -1.5
SKN1YGR143W TAO3P40468 2376 aa5.66□□□□□ -1.5
SKN1YGR143W DCC1P25559 380 aa5.66□□□□□ -1.5
SKN1YGR143W PDC6P26263 563 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W IDH1P28834 360 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SKN1YGR143W YNK1P36010 153 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W EFM1P38732 585 aa5.66□□□□□ -1.5
SKN1YGR143W PEX28P38848 579 aa5.66□□□□□ -1.5
SKN1YGR143W IRC7P43623 340 aa5.66□□□□□ -1.5
SKN1YGR143W RTT101P47050 842 aa5.66□□□□□ -1.5
SKN1YGR143W YJR120WP47157 116 aa5.66□□□□□ -1.5
SKN1YGR143W ARO8P53090 500 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W YGR273CP53329 174 aa5.66□□□□□ -1.5
SKN1YGR143W YNR065CP53751 1116 aa5.66□□□□□ -1.5
SKN1YGR143W RHO3Q00245 231 aaKnown RBP5.66□□□□□ -1.5
SKN1YGR143W YLR407WQ06070 228 aa5.66□□□□□ -1.5
SKN1YGR143W NEJ1Q06148 342 aa5.66□□□□□ -1.5
SKN1YGR143W YOP1Q12402 180 aa5.66□□□□□ -1.5
SKN1YGR143W ATP1P07251 545 aaKnown RBP5.65□□□□□ -1.5
SKN1YGR143W CDC6P09119 513 aa5.65□□□□□ -1.5
SKN1YGR143W AGP1P25376 633 aa5.65□□□□□ -1.5
SKN1YGR143W ECT1P33412 323 aa5.65□□□□□ -1.5
SKN1YGR143W YJL206CP39529 758 aa5.65□□□□□ -1.5
SKN1YGR143W UIP3P39547 235 aa5.65□□□□□ -1.5
SKN1YGR143W GIP2P40036 548 aa5.65□□□□□ -1.5
SKN1YGR143W UBP7P40453 1071 aa5.65□□□□□ -1.5
SKN1YGR143W YAR1P46683 200 aa5.65□□□□□ -1.5
SKN1YGR143W YGL138CP53122 345 aa5.65□□□□□ -1.5
SKN1YGR143W YNR021WP53723 404 aaKnown RBP5.65□□□□□ -1.5
SKN1YGR143W ARK1P53974 638 aa5.65□□□□□ -1.5
SKN1YGR143W TMA10Q06177 86 aa5.65□□□□□ -1.5
SKN1YGR143W ECM30Q06673 1274 aa5.65□□□□□ -1.5
SKN1YGR143W FKS1P38631 1876 aaKnown RBP5.65□□□□□ -1.51
SKN1YGR143W RPS1AP33442 255 aaKnown RBP5.65□□□□□ -1.51
SKN1YGR143W SRO77P38163 1010 aa5.65□□□□□ -1.51
SKN1YGR143W DUN1P39009 513 aa5.65□□□□□ -1.51
SKN1YGR143W SLS1P42900 643 aa5.65□□□□□ -1.51
SKN1YGR143W IRC18P47056 224 aa5.65□□□□□ -1.51
SKN1YGR143W ARH1P48360 493 aa5.65□□□□□ -1.51
SKN1YGR143W COS12P53053 380 aa5.65□□□□□ -1.51
SKN1YGR143W STP1Q00947 519 aa5.65□□□□□ -1.51
SKN1YGR143W PEX25Q02969 394 aa5.65□□□□□ -1.51
SKN1YGR143W PEX12Q04370 399 aa5.65□□□□□ -1.51
SKN1YGR143W AIM33Q04516 312 aa5.65□□□□□ -1.51
SKN1YGR143W YOR365CQ08844 703 aa5.65□□□□□ -1.51
SKN1YGR143W YOR283WQ12040 230 aaKnown RBP5.65□□□□□ -1.51
SKN1YGR143W EFG1Q3E705 233 aaKnown RBP5.65□□□□□ -1.51
SKN1YGR143W FRT1Q99332 602 aa5.65□□□□□ -1.51
SKN1YGR143W PEP5P12868 1029 aa5.64□□□□□ -1.51
SKN1YGR143W MET16P18408 261 aaPredicted RBP5.64□□□□□ -1.51
SKN1YGR143W BUD5P25300 642 aaPredicted RBP5.64□□□□□ -1.51
SKN1YGR143W AHC2P25649 128 aa5.64□□□□□ -1.51
SKN1YGR143W SUA5P32579 426 aa5.64□□□□□ -1.51
SKN1YGR143W IST2P38250 946 aa5.64□□□□□ -1.51
SKN1YGR143W HSL7P38274 827 aa5.64□□□□□ -1.51
SKN1YGR143W ERV15P38312 142 aa5.64□□□□□ -1.51
SKN1YGR143W HXT9P40885 567 aa5.64□□□□□ -1.51
SKN1YGR143W MRX5P47007 382 aa5.64□□□□□ -1.51
SKN1YGR143W BUD17P53727 317 aa5.64□□□□□ -1.51
SKN1YGR143W VPS9P54787 451 aa5.64□□□□□ -1.51
SKN1YGR143W FMN1Q03778 218 aa5.64□□□□□ -1.51
SKN1YGR143W YMR226CQ05016 267 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W ASA1Q06822 443 aa5.64□□□□□ -1.51
SKN1YGR143W SPO75Q07798 868 aa5.64□□□□□ -1.51
SKN1YGR143W SCP1Q08873 200 aa5.64□□□□□ -1.51
SKN1YGR143W SLF1Q12034 447 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51 RIP-Chip
SKN1YGR143W INP53Q12271 1107 aa5.64□□□□□ -1.51
SKN1YGR143W TY1A-DR3Q12441 440 aa5.64□□□□□ -1.51
SKN1YGR143W TMA17Q12513 150 aa5.64□□□□□ -1.51
SKN1YGR143W ECM3Q99252 613 aa5.64□□□□□ -1.51
SKN1YGR143W MOT1P32333 1867 aa5.64□□□□□ -1.51
SKN1YGR143W SSA3P09435 649 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W UNG1P12887 359 aa5.64□□□□□ -1.51
SKN1YGR143W HEM15P16622 393 aa5.64□□□□□ -1.51
SKN1YGR143W UGA1P17649 471 aa5.64□□□□□ -1.51
SKN1YGR143W IMG2P25642 146 aaPredicted RBP5.64□□□□□ -1.51
SKN1YGR143W THI4P32318 326 aa5.64□□□□□ -1.51
SKN1YGR143W ATP11P32453 318 aa5.64□□□□□ -1.51
SKN1YGR143W PTM1P32857 523 aa5.64□□□□□ -1.51
SKN1YGR143W MRPL15P36523 253 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms