RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C KKQ8P36004 724 aa6.2□□□□□ -1.42
YPT1YFL038C CBP4P37267 147 aa6.2□□□□□ -1.42
YPT1YFL038C SCO2P38072 301 aa6.2□□□□□ -1.42
YPT1YFL038C GPX2P38143 162 aa6.2□□□□□ -1.42
YPT1YFL038C STP2P38704 541 aa6.2□□□□□ -1.42
YPT1YFL038C PEX28P38848 579 aa6.2□□□□□ -1.42
YPT1YFL038C CEM1P39525 442 aa6.2□□□□□ -1.42
YPT1YFL038C PCL6P40038 420 aa6.2□□□□□ -1.42
YPT1YFL038C DOT6P40059 670 aaKnown RBP6.2□□□□□ -1.42
YPT1YFL038C RET2P43621 546 aa6.2□□□□□ -1.42
YPT1YFL038C SSY5P47002 699 aa6.2□□□□□ -1.42
YPT1YFL038C RSM7P47150 247 aa6.2□□□□□ -1.42
YPT1YFL038C RIM21P48565 533 aa6.2□□□□□ -1.42
YPT1YFL038C BIO3P50277 480 aa6.2□□□□□ -1.42
YPT1YFL038C COG7P53195 279 aa6.2□□□□□ -1.42
YPT1YFL038C NUP49Q02199 472 aa6.2□□□□□ -1.42
YPT1YFL038C NFI1Q12216 726 aa6.2□□□□□ -1.42
YPT1YFL038C MRX4Q12467 430 aa6.2□□□□□ -1.42
YPT1YFL038C PBS2P08018 668 aa6.19□□□□□ -1.42
YPT1YFL038C RPS21AP0C0V8 87 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C FPR1P20081 114 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C GSH1P32477 678 aa6.19□□□□□ -1.42
YPT1YFL038C LHP1P33399 275 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C SEA4P38164 1038 aa6.19□□□□□ -1.42
YPT1YFL038C ATG14P38270 344 aa6.19□□□□□ -1.42
YPT1YFL038C YHR177WP38867 453 aa6.19□□□□□ -1.42
YPT1YFL038C CCT6P39079 546 aa6.19□□□□□ -1.42
YPT1YFL038C RCY1P39531 840 aa6.19□□□□□ -1.42
YPT1YFL038C SIT1P39980 628 aa6.19□□□□□ -1.42
YPT1YFL038C RRG9P40156 214 aa6.19□□□□□ -1.42
YPT1YFL038C APQ12P40532 138 aa6.19□□□□□ -1.42
YPT1YFL038C YFL066CP43538 392 aa6.19□□□□□ -1.42
YPT1YFL038C YFR020WP43600 232 aa6.19□□□□□ -1.42
YPT1YFL038C PAC10P48363 199 aa6.19□□□□□ -1.42
YPT1YFL038C IMD4P50094 524 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C ARO8P53090 500 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C CPR8P53728 308 aa6.19□□□□□ -1.42
YPT1YFL038C TMN2Q04562 672 aa6.19□□□□□ -1.42
YPT1YFL038C GAD1Q04792 585 aa6.19□□□□□ -1.42
YPT1YFL038C YPS7Q06325 596 aa6.19□□□□□ -1.42
YPT1YFL038C ARO10Q06408 635 aa6.19□□□□□ -1.42
YPT1YFL038C PUN1Q06991 263 aa6.19□□□□□ -1.42
YPT1YFL038C UIP4Q08926 304 aa6.19□□□□□ -1.42
YPT1YFL038C SAM4Q08985 325 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C THP3Q12049 470 aaKnown RBP6.19□□□□□ -1.42
YPT1YFL038C YPL066WQ12194 479 aa6.19□□□□□ -1.42
YPT1YFL038C SIA1Q12212 622 aa6.19□□□□□ -1.42
YPT1YFL038C GPR1Q12361 961 aa6.19□□□□□ -1.42
YPT1YFL038C VPS13Q07878 3144 aa6.19□□□□□ -1.42
YPT1YFL038C RPS17AP02407 136 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C HIP1P06775 603 aa6.18□□□□□ -1.42
YPT1YFL038C RPC40P07703 335 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C YKR104WP0CE69 306 aa6.18□□□□□ -1.42
YPT1YFL038C RPS17BP14127 136 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C SAM35P14693 329 aa6.18□□□□□ -1.42
YPT1YFL038C THR1P17423 357 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C MDH1P17505 334 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
YPT1YFL038C DBP3P20447 523 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C IDP1P21954 428 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C RPL24BP24000 155 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C PTC6P25646 442 aa6.18□□□□□ -1.42
YPT1YFL038C IDH2P28241 369 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C YIM1P28625 365 aa6.18□□□□□ -1.42
YPT1YFL038C SBA1P28707 216 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C MGM101P32787 269 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C MUM2P38236 366 aa6.18□□□□□ -1.42
YPT1YFL038C YHR078WP38799 552 aa6.18□□□□□ -1.42
YPT1YFL038C BUR6P40096 142 aa6.18□□□□□ -1.42
YPT1YFL038C QDR2P40474 542 aa6.18□□□□□ -1.42
YPT1YFL038C MOB1P40484 314 aa6.18□□□□□ -1.42
YPT1YFL038C CWC23P52868 283 aaPredicted RBP6.18□□□□□ -1.42
YPT1YFL038C COS12P53053 380 aa6.18□□□□□ -1.42
YPT1YFL038C MTO1P53070 669 aa6.18□□□□□ -1.42
YPT1YFL038C MAK3Q03503 176 aa6.18□□□□□ -1.42
YPT1YFL038C YLR446WQ06204 433 aa6.18□□□□□ -1.42
YPT1YFL038C EAF1Q06337 982 aa6.18□□□□□ -1.42
YPT1YFL038C YLR036CQ07986 203 aa6.18□□□□□ -1.42
YPT1YFL038C DIN7Q12086 430 aa6.18□□□□□ -1.42
YPT1YFL038C YLR125WQ12138 136 aa6.18□□□□□ -1.42
YPT1YFL038C ACF2Q12168 779 aa6.18□□□□□ -1.42
YPT1YFL038C PDH1Q12428 516 aaKnown RBP6.18□□□□□ -1.42
YPT1YFL038C CHL1P22516 861 aaPredicted RBP6.17□□□□□ -1.42
YPT1YFL038C CHA1P25379 360 aaKnown RBP6.17□□□□□ -1.42
YPT1YFL038C SSO1P32867 290 aa6.17□□□□□ -1.42
YPT1YFL038C DHR2P36009 735 aaPredicted RBP6.17□□□□□ -1.42
YPT1YFL038C YHK8P38776 514 aa6.17□□□□□ -1.42
YPT1YFL038C YHR219WP38900 624 aa6.17□□□□□ -1.42
YPT1YFL038C GDH3P39708 457 aa6.17□□□□□ -1.42
YPT1YFL038C PTC2P39966 464 aaKnown RBP6.17□□□□□ -1.42
YPT1YFL038C OSW5P40219 148 aa6.17□□□□□ -1.42
YPT1YFL038C PRM10P42946 383 aa6.17□□□□□ -1.42
YPT1YFL038C JHD2P47156 728 aaPredicted RBP6.17□□□□□ -1.42
YPT1YFL038C HMS2P47175 358 aa6.17□□□□□ -1.42
YPT1YFL038C MSE1P48525 536 aa6.17□□□□□ -1.42
YPT1YFL038C SDT1P53078 280 aa6.17□□□□□ -1.42
YPT1YFL038C KXD1P53158 218 aa6.17□□□□□ -1.42
YPT1YFL038C YNR021WP53723 404 aaKnown RBP6.17□□□□□ -1.42
YPT1YFL038C YSA1Q01976 231 aa6.17□□□□□ -1.42
YPT1YFL038C RIM13Q03792 727 aa6.17□□□□□ -1.42
YPT1YFL038C RKM1Q08961 583 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms