RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	ATG21	Q02887	496 aa		5.98	□□□□□ -1.45
CDC1	YDR182W	YDR124W	Q04608	324 aa		5.98	□□□□□ -1.45
CDC1	YDR182W	SFH1	Q06168	426 aa		5.98	□□□□□ -1.45
CDC1	YDR182W	ESA1	Q08649	445 aa		5.98	□□□□□ -1.45
CDC1	YDR182W	RPN5	Q12250	445 aa	Known RBP	5.98	□□□□□ -1.45
CDC1	YDR182W	TY1A-DR3	Q12441	440 aa		5.98	□□□□□ -1.45
CDC1	YDR182W	RRP36	Q12481	300 aa	Predicted RBP	5.98	□□□□□ -1.45
CDC1	YDR182W	GPI12	P23797	304 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	SLM5	P25345	492 aa	Known RBP	5.97	□□□□□ -1.45
CDC1	YDR182W	LOS1	P33418	1100 aa	Predicted RBP	5.97	□□□□□ -1.45
CDC1	YDR182W	PTC1	P35182	281 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	DOA1	P36037	715 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	GPI16	P38875	610 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	GIP2	P40036	548 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	YPS7	Q06325	596 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	GET4	Q12125	312 aa		5.97	□□□□□ -1.45
CDC1	YDR182W	GRR1	P24814	1151 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	STE14	P32584	239 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	SSO1	P32867	290 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	RPT5	P33297	434 aa	Known RBP	5.96	□□□□□ -1.45
CDC1	YDR182W	YBL029W	P38201	376 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	AIM2	P39721	246 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	GTO1	P48239	356 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	HOL1	P53389	586 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	ATG4	P53867	494 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	YNL010W	P53981	241 aa	Known RBP	5.96	□□□□□ -1.45
CDC1	YDR182W	IDP3	P53982	420 aa	Known RBP	5.96	□□□□□ -1.45
CDC1	YDR182W	REX2	P54964	269 aa	Known RBP	5.96	□□□□□ -1.45
CDC1	YDR182W	NCA2	Q12374	616 aa		5.96	□□□□□ -1.45
CDC1	YDR182W	ATP4	P05626	244 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	DAP2	P18962	818 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	YCR051W	P25631	222 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	AAR2	P32357	355 aa	Predicted RBP	5.96	□□□□□ -1.46
CDC1	YDR182W	SEC17	P32602	292 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	MSN2	P33748	704 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	CAF4	P36130	643 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	SEA4	P38164	1038 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	FES1	P38260	290 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	BZZ1	P38822	633 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	YEN1	P40028	759 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	CIN1	P40987	1014 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	PMT4	P46971	762 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	ALB1	P47019	175 aa	Predicted RBP	5.96	□□□□□ -1.46
CDC1	YDR182W	ATP22	P50273	684 aa	Predicted RBP	5.96	□□□□□ -1.46
CDC1	YDR182W	YNL165W	P53891	406 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	RHO4	Q00246	291 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	GLO2	Q05584	274 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	YEH2	Q07950	538 aa		5.96	□□□□□ -1.46
CDC1	YDR182W	YTM1	Q12024	460 aa	Predicted RBP	5.96	□□□□□ -1.46
CDC1	YDR182W	CBP2	P03874	630 aa	Predicted RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	RPL20A	P0CX23	172 aa	Known RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	RPL20B	P0CX24	172 aa	Predicted RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	DBR1	P24309	405 aa	Known RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	CAT2	P32796	670 aa	Known RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	DHR2	P36009	735 aa	Predicted RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	MUD2	P36084	527 aa	Known RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	BET3	P36149	193 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	TRR2	P38816	342 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	TAT2	P38967	592 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	PZF1	P39933	429 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	UBP6	P43593	499 aa	Known RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	IRC6	P43615	237 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	YJL043W	P47053	257 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	HSV2	P50079	448 aa	Predicted RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	NAS6	P50086	228 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	TPC1	P53257	314 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	IRC15	Q02733	499 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	YPL068C	Q02749	293 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	SKI8	Q02793	397 aa	Predicted RBP	5.95	□□□□□ -1.46
CDC1	YDR182W	YPL071C	Q02864	156 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	REX3	Q12090	404 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	SKS1	Q12505	502 aa		5.95	□□□□□ -1.46
CDC1	YDR182W	UTP20	P35194	2493 aa	Known RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	RAS2	P01120	322 aa	Known RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	RPS31	P05759	152 aa	Known RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	VPS51	P36116	164 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	IFA38	P38286	347 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
CDC1	YDR182W	SEC26	P41810	973 aa	Known RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	MDV1	P47025	714 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	HOS2	P53096	452 aa	Predicted RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	MPA43	P53583	542 aa	Predicted RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	CUS2	P53830	285 aa	Predicted RBP	5.94	□□□□□ -1.46
CDC1	YDR182W	ECM11	Q04110	302 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	FAR10	Q06001	478 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	VPS74	Q06385	345 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	ATG34	Q12292	412 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	JLP1	Q12358	412 aa		5.94	□□□□□ -1.46
CDC1	YDR182W	ARG81	P05085	880 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	SAC7	P17121	654 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	RPC19	P28000	142 aa	Known RBP	5.93	□□□□□ -1.46
CDC1	YDR182W	MLF3	P32047	452 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	EMP70	P32802	667 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	LHS1	P36016	881 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	STP2	P38704	541 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	YEL020C	P39994	560 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	PSA1	P41940	361 aa	Known RBP	5.93	□□□□□ -1.46
CDC1	YDR182W	ECO1	P43605	281 aa		5.93	□□□□□ -1.46
CDC1	YDR182W	SEH1	P53011	349 aa	Known RBP	5.93	□□□□□ -1.46
CDC1	YDR182W	ARI1	P53111	347 aa	Known RBP	5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms