RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	NSG1	P38837	291 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RGI1	P40043	161 aa	Predicted RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	YGR127W	P53275	312 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RTT102	P53330	157 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	REC102	Q02721	264 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YMD8	Q03697	442 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YHC1	Q05900	231 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	VPS74	Q06385	345 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	ERF2	Q06551	359 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	GAS5	Q08193	484 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YLR049C	Q12110	428 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	FUM1	P08417	488 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	RPS4A	P0CX35	261 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	RPS4B	P0CX36	261 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	YPK1	P12688	680 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	PRP28	P23394	588 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	PPH22	P23595	377 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	SED4	P25365	1065 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	ATP11	P32453	318 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	CCZ1	P38273	704 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	MNN1	P39106	762 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	SPO73	P40031	143 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YIR035C	P40579	254 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YFL052W	P43551	465 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	ALT2	P52892	507 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YGR283C	P53336	341 aa	Predicted RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	HXT11	P54862	567 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	NUP116	Q02630	1113 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YPL113C	Q02961	396 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	SPP1	Q03012	353 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YMR034C	Q05131	434 aa	Predicted RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	MDM12	Q92328	271 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	ADE4	P04046	510 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	KAR1	P11927	433 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	ACB1	P31787	87 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	CAF4	P36130	643 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	FLO10	P36170	1169 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	KSP1	P38691	1029 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	LNP1	P38878	278 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	AFG3	P39925	761 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	UTP7	P40055	554 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	PIG2	P40187	538 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YIL166C	P40445	542 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	YIL024C	P40543	189 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	DUG1	P43616	481 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	AIM22	P47051	409 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	APP1	P53933	587 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	IDP3	P53982	420 aa	Known RBP	3.86	□□□□□ -1.79
VMA1	YDL185W	RKM2	Q03942	479 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	RIF2	Q06208	395 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	THP1	Q08231	455 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	MCA1	Q08601	432 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	HOS1	Q12214	470 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	DCN1	Q12395	269 aa		3.86	□□□□□ -1.79
VMA1	YDL185W	FUR4	P05316	633 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	CDC4	P07834	779 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	TRX2	P22803	104 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	GAC1	P28006	793 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	PPG1	P32838	368 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MRPL37	P36532	105 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YMC2	P38087	329 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MUP3	P38734	546 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	LYS9	P38999	446 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ISC1	P40015	477 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	MID1	P41821	548 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	CAK1	P43568	368 aa	Predicted RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	GNA1	P43577	159 aa	Predicted RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	RET2	P43621	546 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	BFA1	P47113	574 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	JHD2	P47156	728 aa	Predicted RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	UPF3	P48412	387 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	IMO32	P53219	342 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	PLB2	Q03674	706 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	CRN1	Q06440	651 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	NBP2	Q12163	236 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SIA1	Q12212	622 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YLR108C	Q12259	485 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MTR10	Q99189	972 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	APA1	P16550	321 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	DAL81	P21657	970 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RPS1B	P23248	255 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	PTP1	P25044	335 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	LDS1	P31379	325 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	CAT2	P32796	670 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	PDC2	P32896	925 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RPS1A	P33442	255 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	TAT1	P38085	619 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ERT1	P38140	529 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MGE1	P38523	228 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SOH1	P38633	127 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ATM1	P40416	690 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RPL10	P41805	221 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	GDS1	P41913	522 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YJR107W	P47145	328 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	GND2	P53319	492 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ERV29	P53337	310 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YNL146W	P53906	100 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YDR109C	Q04585	715 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	TPO3	Q06451	622 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MRPL35	Q06678	367 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms