RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W VMA13P41807 478 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W TES1P41903 349 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W SED5Q01590 340 aa1.61□□□□□ -2.15
TRM3YDL112W MRS2Q01926 470 aa1.61□□□□□ -2.15
TRM3YDL112W TRS31Q03337 283 aa1.61□□□□□ -2.15
TRM3YDL112W EFR3Q03653 782 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W ARX1Q03862 593 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W AKR2Q12013 749 aa1.61□□□□□ -2.15
TRM3YDL112W ATG29Q12092 213 aa1.61□□□□□ -2.15
TRM3YDL112W RIO1Q12196 484 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W STE3P06783 470 aa1.61□□□□□ -2.15
TRM3YDL112W PHO2P07269 559 aa1.61□□□□□ -2.15
TRM3YDL112W GUK1P15454 187 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W CLB1P24868 471 aa1.61□□□□□ -2.15
TRM3YDL112W AAD3P25612 363 aa1.61□□□□□ -2.15
TRM3YDL112W GCG1P32656 232 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W SFC1P33303 322 aa1.61□□□□□ -2.15
TRM3YDL112W MRPL36P36531 177 aa1.61□□□□□ -2.15
TRM3YDL112W SMF2P38778 549 aa1.61□□□□□ -2.15
TRM3YDL112W YHR127WP38833 243 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W YHR182WP38870 785 aa1.61□□□□□ -2.15
TRM3YDL112W PRP39P39682 629 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W YJR149WP47177 404 aa1.61□□□□□ -2.15
TRM3YDL112W COS12P53053 380 aa1.61□□□□□ -2.15
TRM3YDL112W MDM34P53083 459 aa1.61□□□□□ -2.15
TRM3YDL112W YGR015CP53208 328 aa1.61□□□□□ -2.15
TRM3YDL112W YNR071CP53757 342 aa1.61□□□□□ -2.15
TRM3YDL112W YNL092WP53934 400 aa1.61□□□□□ -2.15
TRM3YDL112W YOR097CQ12274 175 aaPredicted RBP1.61□□□□□ -2.15
TRM3YDL112W RGT2Q12300 763 aa1.61□□□□□ -2.15
TRM3YDL112W PRP8P33334 2413 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W ADE1P27616 306 aa1.61□□□□□ -2.15
TRM3YDL112W MGM101P32787 269 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W YKL100CP34248 587 aa1.61□□□□□ -2.15
TRM3YDL112W KKQ8P36004 724 aa1.61□□□□□ -2.15
TRM3YDL112W ARE2P53629 642 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W YPL108WQ02872 168 aaPredicted RBP1.61□□□□□ -2.15
TRM3YDL112W PRP16P15938 1071 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W IRA1P18963 3092 aa1.6□□□□□ -2.15
TRM3YDL112W GID7P25569 745 aa1.6□□□□□ -2.15
TRM3YDL112W TEF4P36008 412 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W DHR2P36009 735 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W DOA1P36037 715 aa1.6□□□□□ -2.15
TRM3YDL112W CDS1P38221 457 aa1.6□□□□□ -2.15
TRM3YDL112W FTH1P38310 465 aa1.6□□□□□ -2.15
TRM3YDL112W POP4P38336 279 aa1.6□□□□□ -2.15
TRM3YDL112W YMR124WP39523 943 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W ARB1P40024 610 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W ELP2P42935 788 aa1.6□□□□□ -2.15
TRM3YDL112W CDC123Q05791 360 aa1.6□□□□□ -2.15
TRM3YDL112W ECI1Q05871 280 aa1.6□□□□□ -2.15
TRM3YDL112W FAS1P07149 2051 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W RRP1P35178 278 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W GID8P40208 455 aa1.6□□□□□ -2.15
TRM3YDL112W XBP1P40489 647 aa1.6□□□□□ -2.15
TRM3YDL112W BUL1P48524 976 aa1.6□□□□□ -2.15
TRM3YDL112W RPN14P53196 417 aa1.6□□□□□ -2.15
TRM3YDL112W YGR079WP53249 370 aa1.6□□□□□ -2.15
TRM3YDL112W GIP3Q03016 1276 aa1.6□□□□□ -2.15
TRM3YDL112W ORM2Q06144 216 aa1.6□□□□□ -2.15
TRM3YDL112W ICT1Q12385 394 aa1.6□□□□□ -2.15
TRM3YDL112W IRA2P19158 3079 aa1.6□□□□□ -2.15
TRM3YDL112W CDC36P06100 191 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W GPA2P10823 449 aa1.6□□□□□ -2.15
TRM3YDL112W AMD1P15274 810 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W GLK1P17709 500 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W SLM5P25345 492 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W TAH1P25638 111 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W DCG1P32460 244 aa1.6□□□□□ -2.15
TRM3YDL112W SNU114P36048 1008 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W ARO9P38840 513 aaPredicted RBP1.6□□□□□ -2.15
TRM3YDL112W FAD1P38913 306 aa1.6□□□□□ -2.15
TRM3YDL112W YIL152WP40455 235 aa1.6□□□□□ -2.15
TRM3YDL112W ICE2P40499 491 aa1.6□□□□□ -2.15
TRM3YDL112W BNA3P47039 444 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W SHY1P53266 389 aa1.6□□□□□ -2.15
TRM3YDL112W YAP1802P53309 568 aa1.6□□□□□ -2.15
TRM3YDL112W ATP23P53722 227 aa1.6□□□□□ -2.15
TRM3YDL112W ROY1Q04847 553 aa1.6□□□□□ -2.15
TRM3YDL112W NUS1Q12063 375 aa1.6□□□□□ -2.15
TRM3YDL112W YOR342CQ12182 319 aa1.6□□□□□ -2.15
TRM3YDL112W YLR111WQ12528 110 aa1.6□□□□□ -2.15
TRM3YDL112W GCN1P33892 2672 aaKnown RBP1.6□□□□□ -2.15
TRM3YDL112W ADE5,7P07244 802 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W GCY1P14065 312 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
TRM3YDL112W PRP28P23394 588 aa1.59□□□□□ -2.15
TRM3YDL112W PBN1P25580 416 aa1.59□□□□□ -2.15
TRM3YDL112W URA10P30402 227 aa1.59□□□□□ -2.15
TRM3YDL112W ARP2P32381 391 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W NIP1P32497 812 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W KES1P35844 434 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W ASC1P38011 319 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W YHB1P39676 399 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W YEL020CP39994 560 aa1.59□□□□□ -2.15
TRM3YDL112W RAD17P48581 401 aa1.59□□□□□ -2.15
TRM3YDL112W VPS73P53142 486 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W BSC5P53755 489 aa1.59□□□□□ -2.15
TRM3YDL112W PRP38Q00723 242 aaPredicted RBP1.59□□□□□ -2.15
TRM3YDL112W REG1Q00816 1014 aa1.59□□□□□ -2.15
TRM3YDL112W SOV1Q04748 898 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms