RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C YER189WP40104 122 aa1.05□□□□□ -2.24
VAM6YDL077C PIG2P40187 538 aa1.05□□□□□ -2.24
VAM6YDL077C YIL077CP40508 320 aa1.05□□□□□ -2.24
VAM6YDL077C RTS2P40962 232 aa1.05□□□□□ -2.24
VAM6YDL077C MMM1P41800 426 aa1.05□□□□□ -2.24
VAM6YDL077C HXT14P42833 540 aa1.05□□□□□ -2.24
VAM6YDL077C YFL064CP43540 174 aa1.05□□□□□ -2.24
VAM6YDL077C GUF1P46943 645 aa1.05□□□□□ -2.24
VAM6YDL077C PFD1P46988 109 aa1.05□□□□□ -2.24
VAM6YDL077C RPA34P47006 233 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C MRX5P47007 382 aa1.05□□□□□ -2.24
VAM6YDL077C NET1P47035 1189 aa1.05□□□□□ -2.24
VAM6YDL077C YJL043WP47053 257 aa1.05□□□□□ -2.24
VAM6YDL077C LOH1P47055 219 aa1.05□□□□□ -2.24
VAM6YDL077C YGL138CP53122 345 aa1.05□□□□□ -2.24
VAM6YDL077C USE1P53146 245 aa1.05□□□□□ -2.24
VAM6YDL077C IMO32P53219 342 aa1.05□□□□□ -2.24
VAM6YDL077C GPI1P53306 609 aa1.05□□□□□ -2.24
VAM6YDL077C MAL12P53341 584 aa1.05□□□□□ -2.24
VAM6YDL077C ARE2P53629 642 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C FOL1P53848 824 aa1.05□□□□□ -2.24
VAM6YDL077C MTQ1P53944 314 aa1.05□□□□□ -2.24
VAM6YDL077C SIW14P53965 281 aa1.05□□□□□ -2.24
VAM6YDL077C ARK1P53974 638 aa1.05□□□□□ -2.24
VAM6YDL077C RSC9Q03124 581 aa1.05□□□□□ -2.24
VAM6YDL077C CTL1Q03220 320 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C RPN4Q03465 531 aa1.05□□□□□ -2.24
VAM6YDL077C PRP42Q03776 544 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C YET2Q04210 160 aa1.05□□□□□ -2.24
VAM6YDL077C DLT1Q04216 342 aa1.05□□□□□ -2.24
VAM6YDL077C YMR130WQ04223 302 aa1.05□□□□□ -2.24
VAM6YDL077C YDR109CQ04585 715 aa1.05□□□□□ -2.24
VAM6YDL077C CSM3Q04659 317 aa1.05□□□□□ -2.24
VAM6YDL077C YMR074CQ04773 145 aa1.05□□□□□ -2.24
VAM6YDL077C IVY1Q04934 453 aa1.05□□□□□ -2.24
VAM6YDL077C RQC1Q05468 723 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C MRX10Q05648 414 aa1.05□□□□□ -2.24
VAM6YDL077C DUS4Q06063 367 aa1.05□□□□□ -2.24
VAM6YDL077C EST2Q06163 884 aa1.05□□□□□ -2.24
VAM6YDL077C ESF1Q06344 628 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C ECM30Q06673 1274 aa1.05□□□□□ -2.24
VAM6YDL077C HIM1Q06674 414 aa1.05□□□□□ -2.24
VAM6YDL077C MFG1Q07684 458 aa1.05□□□□□ -2.24
VAM6YDL077C PGC1Q08959 321 aa1.05□□□□□ -2.24
VAM6YDL077C KEL3Q08979 651 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C YPL264CQ08980 353 aa1.05□□□□□ -2.24
VAM6YDL077C TMA46Q12000 345 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C REX3Q12090 404 aa1.05□□□□□ -2.24
VAM6YDL077C MDM32Q12171 622 aa1.05□□□□□ -2.24
VAM6YDL077C RPN5Q12250 445 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C MED1Q12321 566 aa1.05□□□□□ -2.24
VAM6YDL077C DGK1Q12382 290 aa1.05□□□□□ -2.24
VAM6YDL077C PFK27Q12471 397 aaPredicted RBP1.05□□□□□ -2.24
VAM6YDL077C AI5_ALPHAQ9ZZX1 630 aa1.05□□□□□ -2.24
VAM6YDL077C FLO1P32768 1537 aa1.05□□□□□ -2.24
VAM6YDL077C FIG2P25653 1609 aa1.05□□□□□ -2.24
VAM6YDL077C FKS1P38631 1876 aaKnown RBP1.05□□□□□ -2.24
VAM6YDL077C COBP00163 385 aa1.04□□□□□ -2.24
VAM6YDL077C COX4P04037 155 aa1.04□□□□□ -2.24
VAM6YDL077C PHR1P05066 565 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C PHO4P07270 312 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C BCY1P07278 416 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C MSF1P08425 469 aa1.04□□□□□ -2.24
VAM6YDL077C YER190C-BP0CX94 160 aa1.04□□□□□ -2.24
VAM6YDL077C YEL077W-AP0CX95 160 aa1.04□□□□□ -2.24
VAM6YDL077C YGR296C-BP0CX96 160 aa1.04□□□□□ -2.24
VAM6YDL077C YPL283W-BP0CX97 160 aa1.04□□□□□ -2.24
VAM6YDL077C YPR204C-AP0CX98 160 aa1.04□□□□□ -2.24
VAM6YDL077C ERG11P10614 530 aa1.04□□□□□ -2.24
VAM6YDL077C LAT1P12695 482 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C SNF4P12904 322 aa1.04□□□□□ -2.24
VAM6YDL077C MTF1P14908 341 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C CBF1P17106 351 aa1.04□□□□□ -2.24
VAM6YDL077C FUR1P18562 216 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YCR007CP25354 239 aa1.04□□□□□ -2.24
VAM6YDL077C ADP1P25371 1049 aa1.04□□□□□ -2.24
VAM6YDL077C CAP1P28495 268 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C FAA1P30624 700 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C DGR2P32330 852 aa1.04□□□□□ -2.24
VAM6YDL077C RNP1P32385 249 aa1.04□□□□□ -2.24
VAM6YDL077C ACP1P32463 125 aa1.04□□□□□ -2.24
VAM6YDL077C NUP2P32499 720 aa1.04□□□□□ -2.24
VAM6YDL077C SRB6P32570 121 aa1.04□□□□□ -2.24
VAM6YDL077C CYS4P32582 507 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C STE14P32584 239 aa1.04□□□□□ -2.24
VAM6YDL077C ORC2P32833 620 aa1.04□□□□□ -2.24
VAM6YDL077C RPT3P33298 428 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C LOT5P34234 306 aa1.04□□□□□ -2.24
VAM6YDL077C MTC2P34246 357 aa1.04□□□□□ -2.24
VAM6YDL077C DOA1P36037 715 aa1.04□□□□□ -2.24
VAM6YDL077C YKL162CP36052 402 aa1.04□□□□□ -2.24
VAM6YDL077C SKG1P36169 355 aa1.04□□□□□ -2.24
VAM6YDL077C PAM1P37304 830 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C SCO2P38072 301 aa1.04□□□□□ -2.24
VAM6YDL077C RIM2P38127 377 aa1.04□□□□□ -2.24
VAM6YDL077C PFF1P38244 976 aa1.04□□□□□ -2.24
VAM6YDL077C SLM4P38247 162 aa1.04□□□□□ -2.24
VAM6YDL077C BMT2P38278 337 aa1.04□□□□□ -2.24
VAM6YDL077C POP4P38336 279 aa1.04□□□□□ -2.24
VAM6YDL077C ERG7P38604 731 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms