RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C MDG1P53885 366 aa3.6□□□□□ -1.83
RPN4YDL020C RUP1Q12242 671 aa3.6□□□□□ -1.83
RPN4YDL020C YCL021W-AQ96VH3 125 aa3.6□□□□□ -1.83
RPN4YDL020C HEM15P16622 393 aa3.59□□□□□ -1.83
RPN4YDL020C SLY1P22213 666 aa3.59□□□□□ -1.83
RPN4YDL020C SPS22P25380 463 aa3.59□□□□□ -1.83
RPN4YDL020C KKQ8P36004 724 aa3.59□□□□□ -1.83
RPN4YDL020C TIF5P38431 405 aaKnown RBP3.59□□□□□ -1.83
RPN4YDL020C FAA2P39518 744 aa3.59□□□□□ -1.83
RPN4YDL020C YMR181CQ03231 154 aa3.59□□□□□ -1.83
RPN4YDL020C SRL2Q12020 392 aa3.59□□□□□ -1.83
RPN4YDL020C PHO2P07269 559 aa3.59□□□□□ -1.84
RPN4YDL020C YBR056WP38081 501 aa3.59□□□□□ -1.84
RPN4YDL020C PFF1P38244 976 aa3.59□□□□□ -1.84
RPN4YDL020C GPI16P38875 610 aa3.59□□□□□ -1.84
RPN4YDL020C ROG1P53118 685 aa3.59□□□□□ -1.84
RPN4YDL020C RTT103Q05543 409 aa3.59□□□□□ -1.84
RPN4YDL020C CDC21P06785 304 aa3.58□□□□□ -1.84
RPN4YDL020C PHO91P27514 894 aa3.58□□□□□ -1.84
RPN4YDL020C VPH1P32563 840 aaKnown RBP3.58□□□□□ -1.84
RPN4YDL020C RGT1P32862 1170 aa3.58□□□□□ -1.84
RPN4YDL020C MLH1P38920 769 aa3.58□□□□□ -1.84
RPN4YDL020C YER079WP40052 210 aaKnown RBP3.58□□□□□ -1.84
RPN4YDL020C BRO1P48582 844 aa3.58□□□□□ -1.84
RPN4YDL020C AZR1P50080 613 aa3.58□□□□□ -1.84
RPN4YDL020C HXT11P54862 567 aa3.58□□□□□ -1.84
RPN4YDL020C MEH1Q02205 184 aa3.58□□□□□ -1.84
RPN4YDL020C STD1Q02794 444 aa3.58□□□□□ -1.84
RPN4YDL020C MMT1Q03218 510 aa3.58□□□□□ -1.84
RPN4YDL020C PPM1Q04081 328 aa3.58□□□□□ -1.84
RPN4YDL020C NDL1Q06568 189 aa3.58□□□□□ -1.84
RPN4YDL020C SNX3Q08826 162 aaKnown RBP3.58□□□□□ -1.84
RPN4YDL020C DST1P07273 309 aa3.57□□□□□ -1.84
RPN4YDL020C STP2P38704 541 aa3.57□□□□□ -1.84
RPN4YDL020C INM1P38710 295 aa3.57□□□□□ -1.84
RPN4YDL020C YHR218WP38899 603 aa3.57□□□□□ -1.84
RPN4YDL020C MLC1P53141 149 aa3.57□□□□□ -1.84
RPN4YDL020C RRP9Q06506 573 aaKnown RBP3.57□□□□□ -1.84
RPN4YDL020C NSE1Q07913 336 aa3.57□□□□□ -1.84
RPN4YDL020C YLR108CQ12259 485 aa3.57□□□□□ -1.84
RPN4YDL020C FRE6Q12473 712 aa3.57□□□□□ -1.84
RPN4YDL020C NFT1P0CE68 1218 aa3.56□□□□□ -1.84
RPN4YDL020C NRP1P32770 719 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
RPN4YDL020C YBR137WP38276 179 aa3.56□□□□□ -1.84
RPN4YDL020C MTC6P38849 526 aa3.56□□□□□ -1.84
RPN4YDL020C YIL067CP40514 678 aa3.56□□□□□ -1.84
RPN4YDL020C CHS6P40955 746 aa3.56□□□□□ -1.84
RPN4YDL020C EOS1P53938 366 aa3.56□□□□□ -1.84
RPN4YDL020C YDR541CQ03049 344 aa3.56□□□□□ -1.84
RPN4YDL020C ESA1Q08649 445 aa3.56□□□□□ -1.84
RPN4YDL020C SKS1Q12505 502 aa3.56□□□□□ -1.84
RPN4YDL020C YER078W-AQ3E7A2 54 aa3.56□□□□□ -1.84
RPN4YDL020C OPI1P21957 404 aa3.55□□□□□ -1.84
RPN4YDL020C QDR3P38227 689 aa3.55□□□□□ -1.84
RPN4YDL020C WSS1P38838 269 aa3.55□□□□□ -1.84
RPN4YDL020C WWM1P43582 211 aaKnown RBP3.55□□□□□ -1.84
RPN4YDL020C NCA3P46955 337 aa3.55□□□□□ -1.84
RPN4YDL020C YPL107WQ02873 248 aa3.55□□□□□ -1.84
RPN4YDL020C YTH1Q06102 208 aaPredicted RBP3.55□□□□□ -1.84
RPN4YDL020C RPL6BP05739 176 aaKnown RBP3.55□□□□□ -1.84
RPN4YDL020C CPR4P25334 318 aa3.55□□□□□ -1.84
RPN4YDL020C CPR3P25719 182 aa3.55□□□□□ -1.84
RPN4YDL020C MUD1P32605 298 aaKnown RBP3.55□□□□□ -1.84
RPN4YDL020C YSC83P32792 385 aa3.55□□□□□ -1.84
RPN4YDL020C MRPL4P36517 319 aa3.55□□□□□ -1.84
RPN4YDL020C EPL1P43572 832 aa3.55□□□□□ -1.84
RPN4YDL020C SFH5P47008 294 aa3.55□□□□□ -1.84
RPN4YDL020C RPL6AQ02326 176 aaKnown RBP3.55□□□□□ -1.84
RPN4YDL020C RRN11Q04712 507 aa3.55□□□□□ -1.84
RPN4YDL020C BCH1Q05029 724 aa3.55□□□□□ -1.84
RPN4YDL020C TPT1Q12272 230 aaKnown RBP3.55□□□□□ -1.84
RPN4YDL020C SPT7P35177 1332 aa3.54□□□□□ -1.84
RPN4YDL020C MSP1P28737 362 aa3.54□□□□□ -1.84
RPN4YDL020C YKL097CP34245 136 aa3.54□□□□□ -1.84
RPN4YDL020C ATP3P38077 311 aaKnown RBP3.54□□□□□ -1.84
RPN4YDL020C YSW1P38280 609 aa3.54□□□□□ -1.84
RPN4YDL020C MNL1P38888 796 aa3.54□□□□□ -1.84
RPN4YDL020C PAC11P40960 533 aa3.54□□□□□ -1.84
RPN4YDL020C YIP5P53108 310 aa3.54□□□□□ -1.84
RPN4YDL020C BOR1P53838 576 aa3.54□□□□□ -1.84
RPN4YDL020C IMP4P53941 290 aaKnown RBP3.54□□□□□ -1.84
RPN4YDL020C SMA2Q04658 369 aa3.54□□□□□ -1.84
RPN4YDL020C SMF3Q12078 473 aaPredicted RBP3.54□□□□□ -1.84
RPN4YDL020C YDR061WQ12298 539 aa3.54□□□□□ -1.84
RPN4YDL020C SKN1P33336 771 aa3.53□□□□□ -1.84
RPN4YDL020C MMF1P40185 145 aaKnown RBP3.53□□□□□ -1.84
RPN4YDL020C SIM1P40472 476 aa3.53□□□□□ -1.84
RPN4YDL020C PRM5P40476 318 aa3.53□□□□□ -1.84
RPN4YDL020C ASN2P49090 572 aaKnown RBP3.53□□□□□ -1.84
RPN4YDL020C TOF1P53840 1238 aa3.53□□□□□ -1.84
RPN4YDL020C TSR1Q07381 788 aaKnown RBP3.53□□□□□ -1.84
RPN4YDL020C NFI1Q12216 726 aa3.53□□□□□ -1.84
RPN4YDL020C RNH203Q12338 110 aa3.53□□□□□ -1.84
RPN4YDL020C SKI3P17883 1432 aaKnown RBP3.53□□□□□ -1.84
RPN4YDL020C YCL068CP25593 260 aa3.52□□□□□ -1.85
RPN4YDL020C SDH3P33421 198 aa3.52□□□□□ -1.85
RPN4YDL020C RRP1P35178 278 aaPredicted RBP3.52□□□□□ -1.85
RPN4YDL020C DAD2P36162 133 aa3.52□□□□□ -1.85
RPN4YDL020C GDT1P38301 280 aaPredicted RBP3.52□□□□□ -1.85
RPN4YDL020C CCT4P39078 528 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms