RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TBC1D32Q96NH3 1257 aa19.69■□□□□ 0.74
PHGDH-227ENST00000641811 SDF4Q9BRK5 362 aa19.69■□□□□ 0.74
PHGDH-227ENST00000641811 NFASCO94856 1347 aa19.69■□□□□ 0.74
PHGDH-227ENST00000641811 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
PHGDH-227ENST00000641811 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 ACRP10323 421 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 XBP1P17861 261 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 DHX38Q92620 1227 aaKnown RBP19.68■□□□□ 0.74
PHGDH-227ENST00000641811 LENG9Q96B70 501 aa19.68■□□□□ 0.74
PHGDH-227ENST00000641811 ZSCAN31Q96LW9 406 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-227ENST00000641811 RBAK-RBAKDNI3L0D1 243 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 IPO5O00410 1097 aaKnown RBP19.67■□□□□ 0.74
PHGDH-227ENST00000641811 CCNE2O96020 404 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 USP11P51784 963 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 ACTR2P61160 394 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 NONOQ15233 471 aaKnown RBP eCLIP19.67■□□□□ 0.74
PHGDH-227ENST00000641811 INF2Q27J81 1249 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 PCYT2Q99447 389 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 ZNF577Q9BSK1 485 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 RNPEPQ9H4A4 650 aa19.67■□□□□ 0.74
PHGDH-227ENST00000641811 CD2BP2O95400 341 aaKnown RBP19.66■□□□□ 0.74
PHGDH-227ENST00000641811 TDP2O95551 362 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 MARK3P27448 753 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 PPIGQ13427 754 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■□□□□ 10
PHGDH-227ENST00000641811 KRT25Q7Z3Z0 450 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 GLG1Q92896 1179 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 WNT8BQ93098 351 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 LRCH3Q96II8 777 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.746e-10■■■■□ 22.4
PHGDH-227ENST00000641811 BACH2Q9BYV9 841 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
PHGDH-227ENST00000641811 ZNF215Q9UL58 517 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-227ENST00000641811 C17orf102A2RUQ5 167 aa19.65■□□□□ 0.74
PHGDH-227ENST00000641811 FAM205CA6NFA0 338 aa19.65■□□□□ 0.74
PHGDH-227ENST00000641811 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-227ENST00000641811 NR5A1Q13285 461 aa19.65■□□□□ 0.74
PHGDH-227ENST00000641811 EARS2Q5JPH6 523 aaKnown RBP19.65■□□□□ 0.74
PHGDH-227ENST00000641811 GJA10Q969M2 543 aa19.65■□□□□ 0.74
PHGDH-227ENST00000641811 VWCEQ96DN2 955 aa19.65■□□□□ 0.74
PHGDH-227ENST00000641811 SH2B1Q9NRF2 756 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-227ENST00000641811 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 MSH4O15457 936 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 TREHO43280 583 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 ST18O60284 1047 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 LGR5O75473 907 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 HOXC8P31273 242 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 BFSP2Q13515 415 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 LRIT3Q3SXY7 679 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 TMEM240Q5SV17 173 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 KRT40Q6A162 431 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 ZNF365Q70YC5 407 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 RETREG2Q8NC44 543 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 ATP6V0A1Q93050 837 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 LLPHQ9BRT6 129 aaKnown RBP19.64■□□□□ 0.73
PHGDH-227ENST00000641811 SMARCAD1Q9H4L7 1026 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 IL23AQ9NPF7 189 aa19.64■□□□□ 0.73
PHGDH-227ENST00000641811 EMSYQ7Z589 1322 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 ATG7O95352 703 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 IQCF3P0C7M6 154 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 KRT2P35908 639 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 GUCY1B3Q02153 619 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 PTK7Q13308 1070 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 TRIM71Q2Q1W2 868 aaKnown RBP19.63■□□□□ 0.73
PHGDH-227ENST00000641811 ABHD15Q6UXT9 468 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 DEFB128Q7Z7B8 93 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 RNPC3Q96LT9 517 aaKnown RBP19.63■□□□□ 0.73
PHGDH-227ENST00000641811 AZI2Q9H6S1 392 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 TBC1D22BQ9NU19 505 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 ERAP1Q9NZ08 941 aa19.63■□□□□ 0.73
PHGDH-227ENST00000641811 TRIP12Q14669 1992 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-227ENST00000641811 CYP3A7-CYP3A51PA0A087WV96 503 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 BTBD18B2RXH4 712 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 MMP1P03956 469 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 CKBP12277 381 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 CYP3A7P24462 503 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 TRIM29Q14134 588 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 Q4G0T1 1027 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 SERINC5Q86VE9 423 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 CCDC155Q8N6L0 562 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 CAGE1Q8TC20 777 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 TNFRSF25Q93038 417 aa19.62■□□□□ 0.73
PHGDH-227ENST00000641811 LAMA3Q16787 3333 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 SLC37A4O43826 429 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 STAT5BP51692 787 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 ADAM17P78536 824 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 NEK8Q86SG6 692 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 CCDC60Q8IWA6 550 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-227ENST00000641811 DIS3L2Q8IYB7 885 aaKnown RBP19.61■□□□□ 0.73
PHGDH-227ENST00000641811 SLC5A5Q92911 643 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 MBOAT7Q96N66 472 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 BRMS1Q9HCU9 246 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 SCN5AQ14524 2016 aa19.61■□□□□ 0.73
PHGDH-227ENST00000641811 IGKV6D-21A0A0A0MT36 114 aa19.6■□□□□ 0.73
PHGDH-227ENST00000641811 BACH1O14867 736 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms