RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 KLRC1P26715 233 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 GPATCH4Q5T3I0 446 aaKnown RBP18.57■□□□□ 0.56
PHGDH-223ENST00000641597 KCNMB3Q9NPA1 279 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 FAM198AQ9UFP1 575 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.57■□□□□ 0.56
PHGDH-223ENST00000641597 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 SLC9A1P19634 815 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 HOXD13P35453 343 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 TUBB4BP68371 445 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 ADAM9Q13443 819 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 TSGA10Q9BZW7 698 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 ANKRD31Q8N7Z5 1873 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 KLRG2A4D1S0 409 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-223ENST00000641597 ANKRD65E5RJM6 399 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 PRPF6O94906 941 aaKnown RBP18.56■□□□□ 0.56
PHGDH-223ENST00000641597 SPIRE1Q08AE8 756 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 IKQ13123 557 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-223ENST00000641597 TRADDQ15628 312 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 SND1Q7KZF4 910 aaKnown RBP eCLIP18.56■□□□□ 0.561e-7■■■■□ 19.4
PHGDH-223ENST00000641597 TRIM59Q8IWR1 403 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 RABEP2Q9H5N1 569 aa18.56■□□□□ 0.56
PHGDH-223ENST00000641597 ZBTB39O15060 712 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 MYBP10242 640 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 SLC12A3P55017 1021 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 ARHGAP4P98171 946 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 PSMD2Q13200 908 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 RRP1BQ14684 758 aaKnown RBP18.55■□□□□ 0.56
PHGDH-223ENST00000641597 CERKLQ49MI3 558 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-223ENST00000641597 SFMBT2Q5VUG0 894 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-223ENST00000641597 FAM71BQ8TC56 605 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 PALMO75781 387 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 FGFR1OPO95684 399 aaKnown RBP18.55■□□□□ 0.56
PHGDH-223ENST00000641597 NR2F2P24468 414 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 SFR1Q86XK3 245 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 REEP2Q9BRK0 252 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 BMP2KQ9NSY1 1161 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-223ENST00000641597 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
PHGDH-223ENST00000641597 TARSL2A2RTX5 802 aaKnown RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 SPATA31C1P0DKV0 1188 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 IRX5P78411 483 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 HAUS3Q68CZ6 603 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 LENG9Q96B70 501 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 DHX36Q9H2U1 1008 aaKnown RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 AJAP1Q9UKB5 411 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 F5H6K3 240 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 ACTN2P35609 894 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 CASP4P49662 377 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 KLRC3Q07444 240 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 KCNH2Q12809 1159 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 KSR1Q8IVT5 923 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 CCDC65Q8IXS2 484 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 TSEN2Q8NCE0 465 aaKnown RBP18.54■□□□□ 0.56
PHGDH-223ENST00000641597 ETNPPLQ8TBG4 499 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.562e-6■■■□□ 15.2
PHGDH-223ENST00000641597 EHD4Q9H223 541 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 CEP72Q9P209 647 aa18.54■□□□□ 0.56
PHGDH-223ENST00000641597 SIPA1L1O43166 1804 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 TRIM66O15016 1216 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 UBXN2AP68543 259 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 SLC9C1Q4G0N8 1177 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 HYIQ5T013 277 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 CCDC181Q5TID7 509 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 GJB7Q6PEY0 223 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 AENQ8WTP8 325 aaKnown RBP18.53■□□□□ 0.56
PHGDH-223ENST00000641597 HYOU1Q9Y4L1 999 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 LRRC37AA6NMS7 1700 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 OPLAHO14841 1288 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 ICA1Q05084 483 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 GIT2Q14161 759 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 TAF3Q5VWG9 929 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 ALS2CR12Q96Q35 445 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 NT5C3AQ9H0P0 336 aa18.53■□□□□ 0.56
PHGDH-223ENST00000641597 SCN9AQ15858 1988 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 EML1O00423 815 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 CLIC2O15247 247 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 PPARDQ03181 441 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 DCAF17Q5H9S7 520 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 TTC19Q6DKK2 380 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 PIGOQ8TEQ8 1089 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 RPGRIP1Q96KN7 1286 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 NOX5Q96PH1 765 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 RUSC1Q9BVN2 902 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 PSD3Q9NYI0 1048 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 ABCB11O95342 1321 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 A0A0U1RQG5 324 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 PJA2O43164 708 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 NDUFB10O96000 172 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 GLI1P08151 1106 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 GCFC2P16383 781 aaKnown RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 AARSP49588 968 aaKnown RBP eCLIP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 DNAJC21Q5F1R6 531 aaKnown RBP18.52■□□□□ 0.56
PHGDH-223ENST00000641597 HHIPL2Q6UWX4 724 aa18.52■□□□□ 0.56
PHGDH-223ENST00000641597 MMGT1Q8N4V1 131 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms