RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 DNAJB2P25686 324 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 ZNF76P36508 570 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 SP4Q02446 784 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 RAB30Q15771 203 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 GALNT17Q6IS24 598 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 TRIM50Q86XT4 487 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 ATP6V0A1Q93050 837 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 C22orf23Q9BZE7 217 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 SMARCAD1Q9H4L7 1026 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 AGO4Q9HCK5 861 aaKnown RBP20.17■□□□□ 0.82
PTPN11-207ENST00000639857 CXXC1Q9P0U4 656 aaPredicted RBP20.17■□□□□ 0.82
PTPN11-207ENST00000639857 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 NRCAMQ92823 1304 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 WDR81Q562E7 1941 aa20.17■□□□□ 0.82
PTPN11-207ENST00000639857 MYH9P35579 1960 aaKnown RBP20.17■□□□□ 0.82
PTPN11-207ENST00000639857 GSTTP1A0A1W2PQM5 241 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 CXCL10P02778 98 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 UTP14CQ5TAP6 766 aaKnown RBP20.16■□□□□ 0.82
PTPN11-207ENST00000639857 DEFB128Q7Z7B8 93 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 CYP2W1Q8TAV3 490 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
PTPN11-207ENST00000639857 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
PTPN11-207ENST00000639857 RNPEPQ9H4A4 650 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 STK36Q9NRP7 1315 aa20.16■□□□□ 0.82
PTPN11-207ENST00000639857 IGLV3-22A0A075B6J6 115 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 PFKFB2O60825 505 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 LGR5O75473 907 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 ARP10275 920 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 CIITAP33076 1130 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 ADAM17P78536 824 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 HIC1Q14526 733 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 DAGLBQ8NCG7 672 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 TIFAQ96CG3 184 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 GUCD1Q96NT3 240 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 PBX4Q9BYU1 374 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 SEMA6BQ9H3T3 888 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 PKD2L1Q9P0L9 805 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 TELO2Q9Y4R8 837 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 PTPRSQ13332 1948 aa20.15■□□□□ 0.82
PTPN11-207ENST00000639857 MICAL3Q7RTP6 2002 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 FAM86B1E9PN63 330 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 FAM86B2P0C5J1 330 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 SLC26A2P50443 739 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 NLRP5P59047 1200 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 ZNF200P98182 395 aaPredicted RBP20.14■□□□□ 0.81
PTPN11-207ENST00000639857 SCRN1Q12765 414 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 STK3Q13188 491 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 TRAF7Q6Q0C0 670 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 PHOSPHO2Q8TCD6 241 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 LMBR1Q8WVP7 490 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 GLG1Q92896 1179 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 FTOQ9C0B1 505 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTPN11-207ENST00000639857 TTYH1Q9H313 450 aaPredicted RBP20.14■□□□□ 0.81
PTPN11-207ENST00000639857 AZI2Q9H6S1 392 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 TPCN1Q9ULQ1 816 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 PCDHA4Q9UN74 947 aa20.14■□□□□ 0.81
PTPN11-207ENST00000639857 COL6A3P12111 3177 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 ZBBXA8MT70 800 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 EFCAB14O75071 495 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 ATG7O95352 703 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 RPLP2P05387 115 aaKnown RBP20.13■□□□□ 0.81
PTPN11-207ENST00000639857 USP11P51784 963 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 AK2P54819 239 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 ACTR2P61160 394 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 ITGB3BPQ13352 177 aaPredicted RBP20.13■□□□□ 0.81
PTPN11-207ENST00000639857 ZNF618Q5T7W0 954 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 TAF2Q6P1X5 1199 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 CNKSR3Q6P9H4 555 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 PLPPR4Q7Z2D5 763 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 WNT8BQ93098 351 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 LARP6Q9BRS8 491 aaKnown RBP20.13■□□□□ 0.81
PTPN11-207ENST00000639857 TBC1D22BQ9NU19 505 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 MSRAQ9UJ68 235 aa20.13■□□□□ 0.81
PTPN11-207ENST00000639857 SIP14410 1827 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 IPO5O00410 1097 aaKnown RBP20.12■□□□□ 0.81
PTPN11-207ENST00000639857 ADAMTS3O15072 1205 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 TREHO43280 583 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 NBNO60934 754 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
PTPN11-207ENST00000639857 THPOP40225 353 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 PPFIA1Q13136 1202 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 GPNMBQ14956 572 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 RPAINQ86UA6 219 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 SETD4Q9NVD3 440 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 PCDHA11Q9Y5I1 949 aa20.12■□□□□ 0.81
PTPN11-207ENST00000639857 IGKV6D-21A0A0A0MT36 114 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 ABHD14A-ACY1A0A1B0GW23 586 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 MBLAC1A4D2B0 266 aaPredicted RBP20.11■□□□□ 0.81
PTPN11-207ENST00000639857 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 XBP1P17861 261 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 RASGRP4Q8TDF6 673 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 PCYT2Q99447 389 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 ZNF577Q9BSK1 485 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 ZNF576Q9H609 170 aa20.11■□□□□ 0.81
PTPN11-207ENST00000639857 CDH23Q9H251 3354 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms