RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 B3GNT9Q6UX72 402 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 CYP26C1Q6V0L0 522 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 STXBP4Q6ZWJ1 553 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 HPS3Q969F9 1004 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 ZKSCAN4Q969J2 545 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-211ENST00000639534 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 SEL1LQ9UBV2 794 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 TCEAL9Q9UHQ7 104 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 CAPN11Q9UMQ6 739 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
CHD1L-211ENST00000639534 A0A1W2PQJ5 194 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 B4DLN1 442 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 SLITRK3O94933 977 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 ARP10275 920 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 PTPN21Q16825 1174 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 ZC3H3Q8IXZ2 948 aaKnown RBP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 OR8K1Q8NGG5 319 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 CPLX3Q8WVH0 158 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 DCPSQ96C86 337 aaKnown RBP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 DYDC2Q96IM9 177 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 UNC45AQ9H3U1 944 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 OLFML3Q9NRN5 406 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 RNF146Q9NTX7 359 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
CHD1L-211ENST00000639534 UBE4BO95155 1302 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.16
CHD1L-211ENST00000639534 MAFGO15525 162 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 CALUO43852 315 aaPredicted RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 KRT9P35527 623 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 HIRAP54198 1017 aaPredicted RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 MARSP56192 900 aaKnown RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 PSMC6P62333 389 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 UBXN2AP68543 259 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 CYP4A11Q02928 519 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 PPP2R3AQ06190 1150 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 GOLGA8FQ08AF8 430 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 GOLGA8DPQ0D2H9 430 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 MUM1L1Q5H9M0 696 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 CATSPERGQ6ZRH7 1159 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 MIER3Q7Z3K6 550 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 REXO1L1PQ8IX06 675 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 REPS2Q8NFH8 660 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
CHD1L-211ENST00000639534 COL20A1Q9P218 1284 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 ODF2LQ9ULJ1 636 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 AFG3L2Q9Y4W6 797 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 PHIPQ8WWQ0 1821 aa16.07■□□□□ 0.16
CHD1L-211ENST00000639534 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 TRAF5O00463 557 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PDXKO00764 312 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RIOK3O14730 519 aaKnown RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 CETN3O15182 167 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 STAM2O75886 525 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 FAM13AO94988 1023 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 P4HBP07237 508 aaKnown RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 ITGB5P18084 799 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 CCND2P30279 289 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 SFNP31947 248 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 HMGCS2P54868 508 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 MTMR1Q13613 665 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PGM5Q15124 567 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 LRRC41Q15345 812 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 CCDC40Q4G0X9 1142 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 MIIPQ5JXC2 388 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 ARHGEF16Q5VV41 709 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RINT1Q6NUQ1 792 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 NLRX1Q86UT6 975 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RDM1Q8NG50 284 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 ZNF592Q92610 1267 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 DNAJC7Q99615 494 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PDCD2LQ9BRP1 358 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-211ENST00000639534 NDST4Q9H3R1 872 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms