RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 SCN10AQ9Y5Y9 1956 aa13.85□□□□□ -0.19
EFHC1-239ENST00000638140 SMIM10L2AP0DMW4 78 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 SMIM10L2BP0DMW5 78 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 XBP1P17861 261 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 CIITAP33076 1130 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 USP11P51784 963 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 BFSP2Q13515 415 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 PRR16Q569H4 304 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 GALNT17Q6IS24 598 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
EFHC1-239ENST00000638140 NSUN7Q8NE18 718 aaKnown RBP13.84□□□□□ -0.19
EFHC1-239ENST00000638140 TBCKQ8TEA7 893 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
EFHC1-239ENST00000638140 JPH1Q9HDC5 661 aaPredicted RBP13.84□□□□□ -0.19
EFHC1-239ENST00000638140 IL23AQ9NPF7 189 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 SETD4Q9NVD3 440 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 NFASCO94856 1347 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
EFHC1-239ENST00000638140 LTBP2Q14767 1821 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 DDX39AO00148 427 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 IPO5O00410 1097 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 DHX15O43143 795 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 JAK2O60674 1132 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 FGBP02675 491 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 MARK3P27448 753 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 ACTR2P61160 394 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 PTK7Q13308 1070 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 DAGLBQ8NCG7 672 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 WASF1Q92558 559 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 GLG1Q92896 1179 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 VWCEQ96DN2 955 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 PCYT2Q99447 389 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 ZNF577Q9BSK1 485 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 SMARCAD1Q9H4L7 1026 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 ZNF215Q9UL58 517 aaPredicted RBP13.83□□□□□ -0.2
EFHC1-239ENST00000638140 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
EFHC1-239ENST00000638140 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 TREHO43280 583 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 ATG7O95352 703 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 CCNE2O96020 404 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 CKBP12277 381 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 DEFB128Q7Z7B8 93 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 CCDC83Q8IWF9 413 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 OXER1Q8TDS5 423 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 WNT8BQ93098 351 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
EFHC1-239ENST00000638140 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
EFHC1-239ENST00000638140 RBAK-RBAKDNI3L0D1 243 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 LGR5O75473 907 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 GNAT1P11488 350 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 HOXC8P31273 242 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 STAT5BP51692 787 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 GPNMBQ14956 572 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
EFHC1-239ENST00000638140 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 KRT25Q7Z3Z0 450 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 CAGE1Q8TC20 777 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 LENG9Q96B70 501 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 AZI2Q9H6S1 392 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 TBC1D22BQ9NU19 505 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 SZT2Q5T011 3432 aa13.81□□□□□ -0.2
EFHC1-239ENST00000638140 DOCK5Q9H7D0 1870 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 MSH4O15457 936 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 SELPP16109 830 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 FOSBP53539 338 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 ADAM17P78536 824 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 SETQ01105 290 aaPredicted RBP13.8□□□□□ -0.2
EFHC1-239ENST00000638140 RABEP1Q15276 862 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 INF2Q27J81 1249 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
EFHC1-239ENST00000638140 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 SWSAP1Q6NVH7 229 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 ABHD15Q6UXT9 468 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 PLPPR4Q7Z2D5 763 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 GJA10Q969M2 543 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 FTOQ9C0B1 505 aaKnown RBP eCLIP13.8□□□□□ -0.2
EFHC1-239ENST00000638140 CXXC1Q9P0U4 656 aaPredicted RBP13.8□□□□□ -0.2
EFHC1-239ENST00000638140 NRCAMQ92823 1304 aa13.8□□□□□ -0.2
EFHC1-239ENST00000638140 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 IGKV6D-21A0A0A0MT36 114 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.79□□□□□ -0.2
EFHC1-239ENST00000638140 CCDC194A0A1B0GVG4 234 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.79□□□□□ -0.2
EFHC1-239ENST00000638140 SLC34A2O95436 690 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 TDP2O95551 362 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 CYP3A7P24462 503 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 THPOP40225 353 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 RBL2Q08999 1139 aa13.79□□□□□ -0.2
EFHC1-239ENST00000638140 NR5A1Q13285 461 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms