RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 FAM26FQ5R3K3 315 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 TREML2Q5T2D2 321 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 CDKAL1Q5VV42 579 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 SPECC1LQ69YQ0 1117 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 FOXR2Q6PJQ5 311 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 LBX2Q6XYB7 198 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 PPFIBP1Q86W92 1011 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 NCAPG2Q86XI2 1143 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 VSTM4Q8IW00 320 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 LRRC8AQ8IWT6 810 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 MYOCDQ8IZQ8 938 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 GUF1Q8N442 669 aaKnown RBP7□□□□□ -1.29
CACNA1D-227ENST00000637844 CSGALNACT2Q8N6G5 542 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 CCDC112Q8NEF3 446 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 DNERQ8NFT8 737 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 RDM1Q8NG50 284 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 GPRASP2Q96D09 838 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 IWS1Q96ST2 819 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 BHMT2Q9H2M3 363 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 UNC45AQ9H3U1 944 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 ZSWIM4Q9H7M6 989 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 SLC39A2Q9NP94 309 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 KCNH7Q9NS40 1196 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 SAMSN1Q9NSI8 373 aaKnown RBP7□□□□□ -1.29
CACNA1D-227ENST00000637844 CYP39A1Q9NYL5 469 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 PKD2L1Q9P0L9 805 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 LIMA1Q9UHB6 759 aaKnown RBP7□□□□□ -1.29
CACNA1D-227ENST00000637844 KCNH4Q9UQ05 1017 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
CACNA1D-227ENST00000637844 A0A1B0GTH6 734 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 WDR64B1ANS9 1081 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 POTEB2H3BUK9 544 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 PES1O00541 588 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 IRF6O14896 467 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 N4BP3O15049 544 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SLITRK3O94933 977 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 FAM13AO94988 1023 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 GNA14O95837 355 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 NR3C2P08235 984 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SPATA31C1P0DKV0 1188 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 CETPP11597 493 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 FCER1AP12319 257 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 ITGB5P18084 799 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 CYP11B2P19099 503 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 MTIF2P46199 727 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 HERVK_113P62684 666 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 MRPS9P82933 396 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 STK4Q13043 487 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 TRIM14Q14142 442 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 CTTNQ14247 550 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 TCP11X2Q5H9J9 407 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 LDLRAD1Q5T700 205 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 ZNF746Q6NUN9 644 aaPredicted RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 DLK2Q6UY11 383 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 PPP4R3CPQ6ZMV5 832 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 KCNK18Q7Z418 384 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SMAP1Q8IYB5 467 aaPredicted RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 LRRC15Q8TF66 581 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 CNKSR2Q8WXI2 1034 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 DNAJC19Q96DA6 116 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 WNK4Q96J92 1243 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 CLMNQ96JQ2 1002 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 ZNF830Q96NB3 372 aaPredicted RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 HSD17B14Q9BPX1 270 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 LXNQ9BS40 222 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 PAGR1Q9BTK6 254 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SRRTQ9BXP5 876 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SPATC1LQ9H0A9 340 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 ASCC2Q9H1I8 757 aaPredicted RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 HSD3B7Q9H2F3 369 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 A1CFQ9NQ94 594 aaKnown RBP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 RGL1Q9NZL6 768 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 ODF2LQ9ULJ1 636 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 RIPK3Q9Y572 518 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 NFASCO94856 1347 aa6.99□□□□□ -1.29
CACNA1D-227ENST00000637844 SMCHD1A6NHR9 2005 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 TRIM49BA6NDI0 452 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 EML1O00423 815 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 CCP110O43303 1012 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 CALUO43852 315 aaPredicted RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 EIF3JO75822 258 aaKnown RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 PSAPP07602 524 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 QARSP47897 775 aaKnown RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 GTF2A2P52657 109 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 COPB1P53618 953 aaKnown RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 CCNA1P78396 465 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 GIT2Q14161 759 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 KCTD2Q14681 263 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 NR1I3Q14994 352 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 KRT31Q15323 416 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 TSR1Q2NL82 804 aaKnown RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 CCDC144BQ3MJ40 725 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 DNTTIP2Q5QJE6 756 aaKnown RBP6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 FKBP15Q5T1M5 1219 aa6.98□□□□□ -1.29
CACNA1D-227ENST00000637844 ANKRD40Q6AI12 368 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms