RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PTPRSQ13332 1948 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 CTSHP09668 335 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 TCF7P36402 384 aaPredicted RBP21.2■□□□□ 0.98
CLN6-220ENST00000637450 HTRA4P83105 476 aaPredicted RBP21.2■□□□□ 0.98
CLN6-220ENST00000637450 ARHGAP4P98171 946 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 UBE2SQ16763 222 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 BMP2KLQ5H9B9 411 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 MYOCDQ8IZQ8 938 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 GDPD5Q8WTR4 605 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 LMBR1Q8WVP7 490 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 SEPT1Q8WYJ6 367 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 SEPT8Q92599 483 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 MTUS1Q9ULD2 1270 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 PCDHA6Q9UN73 950 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 PCDHA8Q9Y5H6 950 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 NRCAMQ92823 1304 aa21.2■□□□□ 0.98
CLN6-220ENST00000637450 GSTTP1A0A1W2PQM5 241 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 SPDYE3A6NKU9 549 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 MAFGO15525 162 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 KCNQ1P51787 676 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 FAM26DQ5JW98 314 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 SYNE3Q6ZMZ3 975 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 MICU3Q86XE3 530 aa21.19■□□□□ 0.98
CLN6-220ENST00000637450 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
CLN6-220ENST00000637450 MTMR1Q13613 665 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 HEATR3Q7Z4Q2 680 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 RPAINQ86UA6 219 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 SP7Q8TDD2 431 aaPredicted RBP21.18■□□□□ 0.98
CLN6-220ENST00000637450 HLA-CQ95604 372 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 TOP1MTQ969P6 601 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 NEK1Q96PY6 1258 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 JADE2Q9NQC1 790 aa21.18■□□□□ 0.98
CLN6-220ENST00000637450 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.17■□□□□ 0.98
CLN6-220ENST00000637450 TSGA10IPQ3SY00 556 aa21.17■□□□□ 0.98
CLN6-220ENST00000637450 APOA5Q6Q788 366 aa21.17■□□□□ 0.98
CLN6-220ENST00000637450 SKAP1Q86WV1 359 aa21.17■□□□□ 0.98
CLN6-220ENST00000637450 APBB2Q92870 758 aa21.17■□□□□ 0.98
CLN6-220ENST00000637450 NECAB3Q96P71 396 aaPredicted RBP21.17■□□□□ 0.98
CLN6-220ENST00000637450 CHRNA1P02708 482 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 TAF2Q6P1X5 1199 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 RUFY4Q6ZNE9 571 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 DHX32Q7L7V1 743 aaKnown RBP21.16■□□□□ 0.98
CLN6-220ENST00000637450 C17orf80Q9BSJ5 609 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 RBM28Q9NW13 759 aaKnown RBP21.16■□□□□ 0.98
CLN6-220ENST00000637450 ERAP1Q9NZ08 941 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 BRPF3Q9ULD4 1205 aa21.16■□□□□ 0.98
CLN6-220ENST00000637450 CNTNAP5Q8WYK1 1306 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 FUT2Q10981 343 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 PPFIA1Q13136 1202 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 TYW1BQ6NUM6 668 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 CENPQQ7L2Z9 268 aaPredicted RBP21.15■□□□□ 0.98
CLN6-220ENST00000637450 TEX2Q8IWB9 1127 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 GLG1Q92896 1179 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 SMARCAD1Q9H4L7 1026 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 EHMT1Q9H9B1 1298 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 RIC8AQ9NPQ8 531 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 PKD2L1Q9P0L9 805 aa21.15■□□□□ 0.98
CLN6-220ENST00000637450 MBLAC1A4D2B0 266 aaPredicted RBP21.14■□□□□ 0.97
CLN6-220ENST00000637450 MARK3P27448 753 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 GRIK4Q16099 956 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 ADCK5Q3MIX3 580 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 FBXO22Q8NEZ5 403 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 TCEANC2Q96MN5 208 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 YME1L1Q96TA2 773 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 MXRA8Q9BRK3 442 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 IFIH1Q9BYX4 1025 aaKnown RBP21.14■□□□□ 0.97
CLN6-220ENST00000637450 KCNH7Q9NS40 1196 aa21.14■□□□□ 0.97
CLN6-220ENST00000637450 V9GY48 417 aaPredicted RBP21.14■□□□□ 0.97
CLN6-220ENST00000637450 ZBTB43O43298 467 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 UPP2O95045 317 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 NAPAP54920 295 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 RTN1Q16799 776 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 MARCH8Q5T0T0 291 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 CYP2W1Q8TAV3 490 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 SAMD11Q96NU1 681 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 PCYT2Q99447 389 aa21.13■□□□□ 0.97
CLN6-220ENST00000637450 JPH1Q9HDC5 661 aaPredicted RBP21.13■□□□□ 0.97
CLN6-220ENST00000637450 DOCK5Q9H7D0 1870 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 FOSP01100 380 aaPredicted RBP21.12■□□□□ 0.97
CLN6-220ENST00000637450 MGAT3Q09327 533 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 EPC2Q52LR7 807 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 RSPH3Q86UC2 560 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 FAM217BQ9NTX9 383 aaPredicted RBP21.12■□□□□ 0.97
CLN6-220ENST00000637450 SLC9A2Q9UBY0 812 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 TUBE1Q9UJT0 475 aa21.12■□□□□ 0.97
CLN6-220ENST00000637450 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.11■□□□□ 0.97
CLN6-220ENST00000637450 RRN3P2A6NIE6 340 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 GHRP10912 638 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 KRT32Q14532 448 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 LPIN1Q14693 890 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 CEP55Q53EZ4 464 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 DNAJB3Q8WWF6 145 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 MICAL3Q7RTP6 2002 aa21.11■□□□□ 0.97
CLN6-220ENST00000637450 NFASCO94856 1347 aa21.1■□□□□ 0.97
CLN6-220ENST00000637450 SMCO2A6NFE2 343 aa21.1■□□□□ 0.97
CLN6-220ENST00000637450 hCG_1984214I3L0E3 225 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms