RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 PTPAQ15257 358 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 DNAJC17Q9NVM6 304 aaKnown RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 TOM1O60784 492 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 KRT19P08727 400 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 GUCY1A3Q02108 690 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 MAP7D1Q3KQU3 841 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 N4BP2L2Q92802 583 aaPredicted RBP17.22■□□□□ 0.35
CLN5-218ENST00000637397 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 E9PMD0 336 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 RASA3Q14644 834 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
CLN5-218ENST00000637397 CASC4Q6P4E1 433 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
CLN5-218ENST00000637397 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 CCNI2Q6ZMN8 369 aaPredicted RBP17.22■□□□□ 0.35
CLN5-218ENST00000637397 BANK1Q8NDB2 785 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 VIPAS39Q9H9C1 493 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 MAPK4P31152 587 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 KCNB1Q14721 858 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 PROM2Q8N271 834 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
CLN5-218ENST00000637397 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
CLN5-218ENST00000637397 CHUKO15111 745 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 ALAS1P13196 640 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 MFAP3P55082 362 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 GDAP1Q8TB36 358 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 NT5C1BQ96P26 610 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 PNKPQ96T60 521 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLN5-218ENST00000637397 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
CLN5-218ENST00000637397 USP17L5A8MUK1 530 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 ACSL3O95573 720 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 MMEP08473 750 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 HSPA6P17066 643 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 BFSP1Q12934 665 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 SLMAPQ14BN4 828 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 CCDC14Q49A88 953 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 NUGGCQ68CJ6 796 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 GUF1Q8N442 669 aaKnown RBP17.21■□□□□ 0.35
CLN5-218ENST00000637397 LRRN4CLQ8ND94 238 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
CLN5-218ENST00000637397 TRIM9Q9C026 710 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 PHBP35232 272 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 ARL1P40616 181 aaPredicted RBP17.21■□□□□ 0.35
CLN5-218ENST00000637397 NCAPHQ15003 741 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 BBOF1Q8ND07 529 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 POMGNT1Q8WZA1 660 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
CLN5-218ENST00000637397 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 GMNCA6NCL1 334 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 PTK2Q05397 1052 aa17.21■□□□□ 0.35
CLN5-218ENST00000637397 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 COASYQ13057 564 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 LIG4P49917 911 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 NLRP14Q86W24 1093 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ZNF354CQ86Y25 554 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 RAD54LQ92698 747 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ATP6V1G3Q96LB4 118 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 PARVGQ9HBI0 331 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
CLN5-218ENST00000637397 SRGNP10124 158 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
CLN5-218ENST00000637397 SMARCAL1Q9NZC9 954 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ANAPC5Q9UJX4 755 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 HPCAL4Q9UM19 191 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 C6orf118Q5T5N4 469 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ANKRD35Q8N283 1001 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 VCX3BQ9H321 246 aa17.2■□□□□ 0.34
CLN5-218ENST00000637397 ACTN3Q08043 901 aaPredicted RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 TMED2Q15363 201 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 ZNF577Q9BSK1 485 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 HPSEQ9Y251 543 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 STK4Q13043 487 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 BEND6Q5SZJ8 279 aaPredicted RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 ANO3Q9BYT9 981 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 BAG2O95816 211 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 PPP2R5DQ14738 602 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 PSD3Q9NYI0 1048 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 NDC80O14777 642 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 BSPRYQ5W0U4 402 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms