RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 CSDE1O75534 798 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 EIF3JO75822 258 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CABYRO75952 493 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 GJB5O95377 273 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CCNE2O96020 404 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CXCL10P02778 98 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SELPP16109 830 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 KCNA2P16389 499 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ITGB5P18084 799 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 POU3F3P20264 500 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CASTP20810 708 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IBSPP21815 317 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 FGFR4P22455 802 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MARK3P27448 753 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CCND2P30279 289 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CD52P31358 61 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IRS1P35568 1242 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADD1P35611 737 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TCF7P36402 384 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 THPOP40225 353 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CPT1AP50416 773 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ERVK-21P61565 698 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IGBP1P78318 339 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 HTRA4P83105 476 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 EXOSC10Q01780 885 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PTPN11Q06124 597 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RBL2Q08999 1139 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MGAT3Q09327 533 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 APOBRQ0VD83 1088 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PTK7Q13308 1070 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ITGB3BPQ13352 177 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 LPIN1Q14693 890 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 WTAPQ15007 396 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RAB30Q15771 203 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 STXBP2Q15833 593 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CLUL1Q15846 466 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PKN1Q16512 942 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 UGCGQ16739 394 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IMMTQ16891 758 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM266Q2M3C6 531 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PAN2Q504Q3 1202 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ASPRV1Q53RT3 343 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PLEKHG4Q58EX7 1191 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TCEAL5Q5H9L2 206 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 GPATCH4Q5T3I0 446 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CREB3L3Q68CJ9 461 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 WWC2Q6AWC2 1192 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 NFRKBQ6P4R8 1299 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CNKSR3Q6P9H4 555 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TRMT1LQ7Z2T5 733 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SESTD1Q86VW0 696 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IQCA1Q86XH1 822 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RPUSD2Q8IZ73 545 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZNF654Q8IZM8 581 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MYOCDQ8IZQ8 938 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 CRIPAKQ8N1N5 446 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RETREG2Q8NC44 543 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 VN1R2Q8NFZ6 395 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SP7Q8TDD2 431 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RASGRP4Q8TDF6 673 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 NSUN6Q8TEA1 469 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM40Q8WWA1 233 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 DNAJB3Q8WWF6 145 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ATP6V0A1Q93050 837 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 EMID1Q96A84 441 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SPATA33Q96N06 139 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 AIFM3Q96NN9 605 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 INPP4AQ96PE3 977 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 IWS1Q96ST2 819 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 UHRF1Q96T88 793 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SH2D3AQ9BRG2 576 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ESYT1Q9BSJ8 1104 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 UBAC1Q9BSL1 405 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 LRFN3Q9BTN0 628 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 AMNQ9BXJ7 453 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 KRT23Q9C075 422 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMX1Q9H3N1 280 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SMOC2Q9H3U7 446 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TUT1Q9H6E5 874 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 EHMT1Q9H9B1 1298 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RC3H2Q9HBD1 1191 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZNF287Q9HBT7 754 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 NCOA5Q9HCD5 579 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ALG13Q9NP73 1137 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 RNF19AQ9NV58 838 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MRPL11Q9Y3B7 192 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 UBIAD1Q9Y5Z9 338 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MRVI1Q9Y6F6 885 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 AKAP13Q12802 2813 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZFHX2Q9C0A1 2572 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TDRD6O60522 2096 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ABCA7Q8IZY2 2146 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 PTPRBP23467 1997 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 IGLV3-22A0A075B6J6 115 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 A0A087WWV3 80 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 LOC102724159A0A0B4J2E5 919 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 C17orf102A2RUQ5 167 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 FAM205CA6NFA0 338 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 MEIS3P2A8K0S8 358 aa1.85□□□□□ -2.11
SYNGAP1-216ENST00000636640 RSPH10B2B2RC85 870 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms