RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ANKS1AQ92625 1134 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ATP6V0A1Q93050 837 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 SLKQ9H2G2 1235 aaPredicted RBP8.53□□□□□ -1.04
CIITA-214ENST00000636238 INCENPQ9NQS7 918 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 PXMP2Q9NR77 195 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 MUTYHQ9UIF7 546 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 FRMPD2Q68DX3 1309 aaPredicted RBP8.53□□□□□ -1.04
CIITA-214ENST00000636238 ADGRA3Q8IWK6 1321 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 H3BRB1 525 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 ZNF213O14771 459 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 PSMA5P28066 241 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 HSD17B4P51659 736 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 ZXDAP98168 799 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 HYAL1Q12794 435 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 KRT32Q14532 448 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 CDC37Q16543 378 aaPredicted RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 IMMTQ16891 758 aaKnown RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 TAF2Q6P1X5 1199 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 CHST3Q7LGC8 479 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 VSIG10LQ86VR7 867 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 ESR2Q92731 530 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 WNT8BQ93098 351 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 MSLNLQ96KJ4 702 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 NEK1Q96PY6 1258 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 TAAR1Q96RJ0 339 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 C16orf70Q9BSU1 422 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 TUT1Q9H6E5 874 aaKnown RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 RNF216Q9NWF9 866 aaPredicted RBP8.52□□□□□ -1.05
CIITA-214ENST00000636238 SQORQ9Y6N5 450 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
CIITA-214ENST00000636238 GFRA3O60609 400 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 HSP90AA1P07900 732 aaKnown RBP8.51□□□□□ -1.05
CIITA-214ENST00000636238 LINC00271P0C7V0 271 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 ZNF286BP0CG31 522 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 SMIM10L2AP0DMW4 78 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 SMIM10L2BP0DMW5 78 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 ICAM3P32942 547 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 UBE3AQ05086 875 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 TCF15Q12870 199 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 NEDD9Q14511 834 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 GNPTABQ3T906 1256 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 USH1GQ495M9 461 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 MFSD6Q6ZSS7 791 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 EP400NLQ6ZTU2 488 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 TBC1D10CQ8IV04 446 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 PPP1R13LQ8WUF5 828 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 ZNF689Q96CS4 500 aaPredicted RBP8.51□□□□□ -1.05
CIITA-214ENST00000636238 TMX3Q96JJ7 454 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 CDCA3Q99618 268 aaPredicted RBP8.51□□□□□ -1.05
CIITA-214ENST00000636238 PDCD2LQ9BRP1 358 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 PHF7Q9BWX1 381 aaPredicted RBP8.51□□□□□ -1.05
CIITA-214ENST00000636238 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 TOMM22Q9NS69 142 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 COL20A1Q9P218 1284 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
CIITA-214ENST00000636238 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 SIP14410 1827 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 NRCAMQ92823 1304 aa8.51□□□□□ -1.05
CIITA-214ENST00000636238 TET1Q8NFU7 2136 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 GRM6O15303 877 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 DTNBO60941 627 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 TBX10O75333 385 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 LARGE1O95461 756 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 GGPS1O95749 300 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 SRGAP2BP0DMP2 458 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 UBA1P22314 1058 aaKnown RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 CCND2P30279 289 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 MCM2P49736 904 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 NDUFV1P49821 464 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 TOB2Q14106 344 aaPredicted RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 SCN5AQ14524 2016 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 HSDL1Q3SXM5 330 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 XRRA1Q6P2D8 792 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 METTL7BQ6UX53 244 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 Q6ZUG5 572 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 CMTR2Q8IYT2 770 aaKnown RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 ADGRF4Q8IZF3 695 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
CIITA-214ENST00000636238 PNMA1Q8ND90 353 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 FTHL17Q9BXU8 183 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 EHMT1Q9H9B1 1298 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 LCTP09848 1927 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms