RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 STAM2O75886 525 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 IFNAR1P17181 557 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 HOXC8P31273 242 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 ADCY7P51828 1080 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 DEFB103AP81534 67 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 GNPTABQ3T906 1256 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 TEX2Q8IWB9 1127 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 PHKBQ93100 1093 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 SLC28A3Q9HAS3 691 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 PCDHA11Q9Y5I1 949 aa17.81■□□□□ 0.44
LINC00339-209ENST00000635450 SMCO2A6NFE2 343 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 SMIM10L2AP0DMW4 78 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 SMIM10L2BP0DMW5 78 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 ACTN1P12814 892 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 ITGB5P18084 799 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 NEK4P51957 841 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 WDR5P61964 334 aaKnown RBP17.8■□□□□ 0.44
LINC00339-209ENST00000635450 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
LINC00339-209ENST00000635450 PTK7Q13308 1070 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 NTRK3Q16288 839 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
LINC00339-209ENST00000635450 CERS4Q9HA82 394 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 LOXHD1Q8IVV2 1947 aa17.8■□□□□ 0.44
LINC00339-209ENST00000635450 LCHNA4D1U4 455 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 H3BRB1 525 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 RFXAPO00287 272 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
LINC00339-209ENST00000635450 CXCL10P02778 98 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 KCNA2P16389 499 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 AK2P54819 239 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
LINC00339-209ENST00000635450 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 SERINC5Q86VE9 423 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 HERC6Q8IVU3 1022 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 SLC9A7Q96T83 725 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 GAS2L1Q99501 681 aaPredicted RBP17.79■□□□□ 0.44
LINC00339-209ENST00000635450 TUT1Q9H6E5 874 aaKnown RBP17.79■□□□□ 0.44
LINC00339-209ENST00000635450 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
LINC00339-209ENST00000635450 PCDHA6Q9UN73 950 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 PCDHA8Q9Y5H6 950 aa17.79■□□□□ 0.44
LINC00339-209ENST00000635450 MUC3AQ02505 3323 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 TREHO43280 583 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 PPFIA3O75145 1194 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 CDKL5O76039 1030 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 FOSP01100 380 aaPredicted RBP17.78■□□□□ 0.44
LINC00339-209ENST00000635450 NEDD9Q14511 834 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 CCDC85BQ15834 202 aaPredicted RBP17.78■□□□□ 0.44
LINC00339-209ENST00000635450 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 RNPEPQ9H4A4 650 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 SETD4Q9NVD3 440 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
LINC00339-209ENST00000635450 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 WDR81Q562E7 1941 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 BAIAP3O94812 1187 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 DEXIO95424 95 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 CTSHP09668 335 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 IGFBP4P22692 258 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 GNA11P29992 359 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 TAP1Q03518 808 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 PKN1Q16512 942 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 KRT40Q6A162 431 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 NLRX1Q86UT6 975 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 CYP2W1Q8TAV3 490 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 LMBR1Q8WVP7 490 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 ATP6V0A1Q93050 837 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
LINC00339-209ENST00000635450 BRWD1Q9NSI6 2320 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 NLRC5Q86WI3 1866 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 ESYT2A0FGR8 921 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 PFKFB2O60825 505 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 THPOP40225 353 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 SCRN1Q12765 414 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 AP3B2Q13367 1082 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 MCTP2Q6DN12 878 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 ZMYND12Q9H0C1 365 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
LINC00339-209ENST00000635450 ATG2AQ2TAZ0 1938 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 GSTTP1A0A1W2PQM5 241 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 TCF7P36402 384 aaPredicted RBP17.75■□□□□ 0.43
LINC00339-209ENST00000635450 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
LINC00339-209ENST00000635450 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 ZBTB10Q96DT7 871 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 CDHR1Q96JP9 859 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 ANO3Q9BYT9 981 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 SH3GLB2Q9NR46 395 aa17.75■□□□□ 0.43
LINC00339-209ENST00000635450 TCF20Q9UGU0 1960 aaKnown RBP17.75■□□□□ 0.43
LINC00339-209ENST00000635450 MARK3P27448 753 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms