RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PCDH18Q9HCL0 1135 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 KLHL14Q9P2G3 628 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 PPARGC1AQ9UBK2 798 aaKnown RBP5.92□□□□□ -1.46
CDKL5-207ENST00000624700 NUDT19A8MXV4 375 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 SGSM2O43147 1006 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 COL6A2P12110 1019 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 PDE6AP16499 860 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 SYN1P17600 705 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 GJA4P35212 333 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 EPHA5P54756 1037 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 PRR5P85299 388 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 OCRLQ01968 901 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 DHCR24Q15392 516 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 TARBP2Q15633 366 aaKnown RBP5.91□□□□□ -1.46
CDKL5-207ENST00000624700 HHIPL2Q6UWX4 724 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 OVCH1Q7RTY7 1134 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 OSTM1Q86WC4 334 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 THNSL2Q86YJ6 484 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 OR2W6PQ8NHA6 318 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 PIP4K2CQ8TBX8 421 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 DACT3Q96B18 629 aaPredicted RBP5.91□□□□□ -1.46
CDKL5-207ENST00000624700 MTFR1LQ9H019 292 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 RTEL1Q9NZ71 1219 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 B4GALT6Q9UBX8 382 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 COQ6Q9Y2Z9 468 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 PCDHB4Q9Y5E5 795 aa5.91□□□□□ -1.46
CDKL5-207ENST00000624700 SLC12A8A0AV02 714 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 M0R2C6 588 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CBX4O00257 560 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 N4BP3O15049 544 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 ZEB2O60315 1214 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 GAS7O60861 476 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CLASP2O75122 1294 aaKnown RBP5.9□□□□□ -1.46
CDKL5-207ENST00000624700 SASH1O94885 1247 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CNGA1P29973 690 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 VIPR1P32241 457 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 ZNF460Q14592 562 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 PTPROQ16827 1216 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 FIGNQ5HY92 759 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 OTOP1Q7RTM1 612 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CHST14Q8NCH0 376 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 TTLL11Q8NHH1 800 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 RNF38Q9H0F5 515 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CNTD2Q9H8S5 307 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.9□□□□□ -1.46
CDKL5-207ENST00000624700 MYOTQ9UBF9 498 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 ASH2LQ9UBL3 628 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 CBLCQ9ULV8 474 aa5.9□□□□□ -1.46
CDKL5-207ENST00000624700 ZNF561-AS1K7EIQ3 104 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 BRINP1O60477 761 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 F2P00734 622 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 NCAM1P13591 858 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 MECP2P51608 486 aaKnown RBP5.89□□□□□ -1.47
CDKL5-207ENST00000624700 AFF3P51826 1226 aaKnown RBP5.89□□□□□ -1.47
CDKL5-207ENST00000624700 EPHB3P54753 998 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 ABHD17CQ6PCB6 329 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 KCTD1Q719H9 257 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-207ENST00000624700 RNF180Q86T96 592 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 PASD1Q8IV76 773 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 LEO1Q8WVC0 666 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-207ENST00000624700 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 BOCQ9BWV1 1114 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 XYLT2Q9H1B5 865 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 HSPBP1Q9NZL4 362 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 FBLN5Q9UBX5 448 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 SRPK3Q9UPE1 567 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 ATP23Q9Y6H3 246 aa5.89□□□□□ -1.47
CDKL5-207ENST00000624700 TCRBV5S2A0A599 114 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 TRAF5O00463 557 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 NKRFO15226 690 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 KPNA6O60684 536 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 HIP1RO75146 1068 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 GLRX3O76003 335 aaKnown RBP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 PFKLP17858 780 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 JAM2P57087 298 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 PCBP1Q15365 356 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 ZNF174Q15697 407 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 PLEKHN1Q494U1 663 aaPredicted RBP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 ALG3Q92685 438 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 DDX11Q96FC9 970 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 YIPF4Q9BSR8 244 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 MCM8Q9UJA3 840 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 JAG2Q9Y219 1238 aa5.88□□□□□ -1.47
CDKL5-207ENST00000624700 NOP58Q9Y2X3 529 aaKnown RBP5.88□□□□□ -1.47
CDKL5-207ENST00000624700 PTPDC1A2A3K4 754 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 H7C1D1 291 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 SLC27A2O14975 620 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 CYP17A1P05093 508 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 KRT15P19012 456 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 SDHBP21912 280 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 NFKB2Q00653 900 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 FAPQ12884 760 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 TUSC3Q13454 348 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 BTBD8Q5XKL5 378 aa5.87□□□□□ -1.47
CDKL5-207ENST00000624700 DBX2Q6ZNG2 339 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms