RNA–Protein interactions for RNA: ENST00000623650.3

SNHG5-217, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 886 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-217	ENST00000623650	CLEC10A	Q8IUN9	316 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	SPICE1	Q8N0Z3	855 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	NECAB1	Q8N987	351 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	CCDC148	Q8NFR7	591 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	MKL1	Q969V6	931 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	TRIM47	Q96LD4	638 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	GSX2	Q9BZM3	304 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	IL17RB	Q9NRM6	502 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	CNTN3	Q9P232	1028 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	SNCAIP	Q9Y6H5	919 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	AK5	Q9Y6K8	562 aa		9.36	□□□□□ -0.91
SNHG5-217	ENST00000623650	TMEM232	C9JQI7	657 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	hCG_1984214	I3L0E3	225 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SCAMP3	O14828	347 aa	Known RBP	9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	FLOT1	O75955	427 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SASH3	O75995	380 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	DEXI	O95424	95 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	PDHB	P11177	359 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	HMGCS2	P54868	508 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	EVC	P57679	992 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	ZNF543	Q08ER8	600 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	ME3	Q16798	604 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	9.35	□□□□□ -0.91	1e-30	■■□□□ 13.4
SNHG5-217	ENST00000623650	FAM83B	Q5T0W9	1011 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	LDLRAD1	Q5T700	205 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SYDE2	Q5VT97	1194 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	RGMB	Q6NW40	437 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	TREML4	Q6UXN2	200 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	TMTC3	Q6ZXV5	915 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	HOMER1	Q86YM7	354 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	ZNF713	Q8N859	430 aa	Predicted RBP	9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	C1orf127	Q8N9H9	656 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SMCR8	Q8TEV9	937 aa	Predicted RBP	9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SLF1	Q9BQI6	1058 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	GLT8D2	Q9H1C3	349 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	CHRD	Q9H2X0	955 aa		9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	ORC3	Q9UBD5	711 aa	Predicted RBP	9.35	□□□□□ -0.91
SNHG5-217	ENST00000623650	SSC5D	A1L4H1	1573 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	CCL15-CCL14	A0A0B4J2E2	113 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	MANSC4	A6NHS7	340 aa	Predicted RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	BNIP3L	O60238	219 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	IFNAR1	P17181	557 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	CALML3	P27482	149 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	SMARCA1	P28370	1054 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	SCRN1	Q12765	414 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	TROAP	Q12815	778 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	CCL15	Q16663	113 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	LCE2A	Q5TA79	106 aa	Predicted RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	KCTD1	Q719H9	257 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	HEATR3	Q7Z4Q2	680 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	TMEM87A	Q8NBN3	555 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	BICD2	Q8TD16	824 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	ACER1	Q8TDN7	264 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	EPS8L3	Q8TE67	593 aa	Known RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	PIBF1	Q8WXW3	757 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	CUL5	Q93034	780 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	DDX11	Q96FC9	970 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	WNK4	Q96J92	1243 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	C8orf76	Q96K31	380 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	RNF26	Q9BY78	433 aa	Predicted RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	RPAP3	Q9H6T3	665 aa	Predicted RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	EHMT1	Q9H9B1	1298 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	NCOA5	Q9HCD5	579 aa	Known RBP	9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	VAT1L	Q9HCJ6	419 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	NDFIP2	Q9NV92	336 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	HOXC10	Q9NYD6	342 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	MARK1	Q9P0L2	795 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	FZD1	Q9UP38	647 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	ATP6V1D	Q9Y5K8	247 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	TACC3	Q9Y6A5	838 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	NID2	Q14112	1375 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	DOCK1	Q14185	1865 aa		9.34	□□□□□ -0.91
SNHG5-217	ENST00000623650	STK36	Q9NRP7	1315 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	VPS37C	A5D8V6	355 aa	Predicted RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	GIPC1	O14908	333 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	EREG	O14944	169 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	GOLGA8H	P0CJ92	632 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	SLURP2	P0DP57	97 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	VCAM1	P19320	739 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	CES1	P23141	567 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	TARS	P26639	723 aa	Known RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	GJB2	P29033	226 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	GUCY1A2	P33402	732 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	COPB2	P35606	906 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	INHBE	P58166	350 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	NUCB2	P80303	420 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	LARP1B	Q659C4	914 aa	Known RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	MOB2	Q70IA6	237 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	KRT25	Q7Z3Z0	450 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	CCDC84	Q86UT8	332 aa	Predicted RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	GALNT12	Q8IXK2	581 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	FAM177A1	Q8N128	213 aa	Predicted RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	MB21D1	Q8N884	522 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	PRPF38A	Q8NAV1	312 aa	Known RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	CLMN	Q96JQ2	1002 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	PARK7	Q99497	189 aa	Known RBP	9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	ALG1	Q9BT22	464 aa		9.33	□□□□□ -0.92
SNHG5-217	ENST00000623650	SPZ1	Q9BXG8	430 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms