RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SFNP31947 248 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 HIRAP54198 1017 aaPredicted RBP18.13■□□□□ 0.49
LDB3-208ENST00000623007 PMS1P54277 932 aaKnown RBP18.13■□□□□ 0.49
LDB3-208ENST00000623007 RPS6P62753 249 aaKnown RBP18.13■□□□□ 0.49
LDB3-208ENST00000623007 PPP2R3AQ06190 1150 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 NLRX1Q86UT6 975 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 CYP2W1Q8TAV3 490 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
LDB3-208ENST00000623007 TIPINQ9BVW5 301 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 SEMA6BQ9H3T3 888 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 CCND2P30279 289 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 JAK3P52333 1124 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 HMGCS2P54868 508 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 MTMR1Q13613 665 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 GIT2Q14161 759 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 MAN2A1Q16706 1144 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 E4F1Q66K89 784 aaPredicted RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 CREBRFQ8IUR6 639 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ZNF507Q8TCN5 953 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 GJA10Q969M2 543 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ERGIC2Q96RQ1 377 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 NOC4LQ9BVI4 516 aaKnown RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 KCNH7Q9NS40 1196 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 FBXO40Q9UH90 709 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 EIF3DO15371 548 aaKnown RBP eCLIP18.12■□□□□ 0.49
LDB3-208ENST00000623007 USP2O75604 605 aaPredicted RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 SLITRK3O94933 977 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 LYPLA2O95372 231 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 P4HBP07237 508 aaKnown RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 MARSP56192 900 aaKnown RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 KRT76Q01546 638 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 RBL2Q08999 1139 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 PABPC4Q13310 644 aaKnown RBP eCLIP18.12■□□□□ 0.49
LDB3-208ENST00000623007 BMT2Q1RMZ1 405 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 REPS2Q8NFH8 660 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 GPRASP2Q96D09 838 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ATG4CQ96DT6 458 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 C16orf45Q96MC5 204 aaPredicted RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 RMDN3Q96TC7 470 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ZSWIM4Q9H7M6 989 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 ACAD9Q9H845 621 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 SCAF8Q9UPN6 1271 aaKnown RBP18.12■□□□□ 0.49
LDB3-208ENST00000623007 PCDHA2Q9Y5H9 948 aa18.12■□□□□ 0.49
LDB3-208ENST00000623007 SSC5DA1L4H1 1573 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 A0A1W2PQJ5 194 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 UNCXA6NJT0 531 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 CALUO43852 315 aaPredicted RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 RPL13P26373 211 aaKnown RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 COPB2P35606 906 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 TBC1D8BQ0IIM8 1120 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 ALCAMQ13740 583 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 PGM5Q15124 567 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 ZCWPW2Q504Y3 356 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 ARSHQ5FYA8 562 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 MIER3Q7Z3K6 550 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 TMEM139Q8IV31 216 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 SLC17A8Q8NDX2 589 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 MYRIPQ8NFW9 859 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 NSUN6Q8TEA1 469 aaKnown RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 EDEM3Q9BZQ6 932 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 BHMT2Q9H2M3 363 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 AGO4Q9HCK5 861 aaKnown RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 PXMP2Q9NR77 195 aa18.11■□□□□ 0.49
LDB3-208ENST00000623007 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
LDB3-208ENST00000623007 PDXKO00764 312 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
LDB3-208ENST00000623007 GYPCP04921 128 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 CCDC175P0C221 793 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 ITGB5P18084 799 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 PPATQ06203 517 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 SNRNP48Q6IEG0 339 aaKnown RBP18.1■□□□□ 0.49
LDB3-208ENST00000623007 CYP26C1Q6V0L0 522 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 TPH2Q8IWU9 490 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 PPP1R13BQ96KQ4 1090 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 PDCD2LQ9BRP1 358 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 DBR1Q9UK59 544 aaKnown RBP18.1■□□□□ 0.49
LDB3-208ENST00000623007 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 TRAF3IP3Q9Y228 551 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
LDB3-208ENST00000623007 B4DLN1 442 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 EML1O00423 815 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 PES1O00541 588 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 CXCL11O14625 94 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 ARP10275 920 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 GUCY2CP25092 1073 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 CASP14P31944 242 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
LDB3-208ENST00000623007 ADKP55263 362 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 CYP4A11Q02928 519 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 VWA3BQ502W6 1294 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms