RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 CCDC77Q9BR77 488 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 ZMYND12Q9H0C1 365 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 BZW2Q9Y6E2 419 aaKnown RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 GJA3Q9Y6H8 435 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 ANO9A1A5B4 782 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 PSMC2P35998 433 aaKnown RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 VPS41P49754 854 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 LIG3P49916 1009 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 WDR44Q5JSH3 913 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 CEP57Q86XR8 500 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 GIMAP7Q8NHV1 300 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 USTQ9Y2C2 406 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 RAD17O75943 681 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 TFRCP02786 760 aaKnown RBP14.03□□□□□ -0.16
MSH6-215ENST00000622629 PDHBP11177 359 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 MIGA2Q7L4E1 593 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 ANKS4BQ8N8V4 417 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 TEKT3Q9BXF9 490 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 STIM2Q9P246 746 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 CCPG1Q9ULG6 757 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 NPHP3-ACAD11A0A0J9YXS1 232 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
MSH6-215ENST00000622629 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
MSH6-215ENST00000622629 GPATCH11Q8N954 259 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 MRRFQ96E11 262 aaKnown RBP14.03□□□□□ -0.16
MSH6-215ENST00000622629 OSBPL9Q96SU4 736 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 INTS13Q9NVM9 706 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 RRP15Q9Y3B9 282 aaKnown RBP14.03□□□□□ -0.16
MSH6-215ENST00000622629 F5H6K3 240 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 KLRC3Q07444 240 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 PRKG1Q13976 671 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 CNPY4Q8N129 248 aa14.03□□□□□ -0.16
MSH6-215ENST00000622629 ZBTB7AO95365 584 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 GGCXP38435 758 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 STAT2P52630 851 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 MESDQ14696 234 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 PLA2G4AP47712 749 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 PPM1EQ8WY54 764 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 RAB17Q9H0T7 212 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 STMN4Q9H169 189 aaPredicted RBP14.02□□□□□ -0.16
MSH6-215ENST00000622629 PRM3Q9NNZ6 103 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 SMARCAL1Q9NZC9 954 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.16
MSH6-215ENST00000622629 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 FERP16591 822 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.17
MSH6-215ENST00000622629 PROM2Q8N271 834 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 RIN2Q8WYP3 895 aaPredicted RBP14.02□□□□□ -0.17
MSH6-215ENST00000622629 IFT74Q96LB3 600 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 NSRP1Q9H0G5 558 aaKnown RBP14.02□□□□□ -0.17
MSH6-215ENST00000622629 PARVGQ9HBI0 331 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 CEP72Q9P209 647 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.17
MSH6-215ENST00000622629 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.17
MSH6-215ENST00000622629 FMN2Q9NZ56 1722 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 A6NNZ2 444 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PLEKP08567 350 aaPredicted RBP14.01□□□□□ -0.17
MSH6-215ENST00000622629 DESP17661 470 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 TUBB8Q3ZCM7 444 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 C16orf86Q6ZW13 317 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
MSH6-215ENST00000622629 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PGRMC1O00264 195 aaKnown RBP14.01□□□□□ -0.17
MSH6-215ENST00000622629 ZBTB22O15209 634 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 TNNI1P19237 187 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PMS1P54277 932 aaKnown RBP14.01□□□□□ -0.17
MSH6-215ENST00000622629 MYL7Q01449 175 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 ZNF365Q70YC5 407 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 NLRX1Q86UT6 975 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 SPATA4Q8NEY3 305 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 SAMD15Q9P1V8 674 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.01□□□□□ -0.17
MSH6-215ENST00000622629 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PSMD1Q99460 953 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PALM3A6NDB9 673 aaPredicted RBP14.01□□□□□ -0.17
MSH6-215ENST00000622629 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 NT5DC1Q5TFE4 455 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 TMEM179Q6ZVK1 233 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 PNKPQ96T60 521 aa14.01□□□□□ -0.17
MSH6-215ENST00000622629 CHD2O14647 1828 aaKnown RBP14□□□□□ -0.17
MSH6-215ENST00000622629 WNT7AO00755 349 aa14□□□□□ -0.17
MSH6-215ENST00000622629 NPR1P16066 1061 aa14□□□□□ -0.17
MSH6-215ENST00000622629 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
MSH6-215ENST00000622629 DENND2CQ68D51 928 aa14□□□□□ -0.17
MSH6-215ENST00000622629 LRRC1Q9BTT6 524 aa14□□□□□ -0.17
MSH6-215ENST00000622629 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
MSH6-215ENST00000622629 TNS2Q63HR2 1409 aa14□□□□□ -0.17
MSH6-215ENST00000622629 NNTQ13423 1086 aa14□□□□□ -0.17
MSH6-215ENST00000622629 CNKSR1Q969H4 720 aa14□□□□□ -0.17
MSH6-215ENST00000622629 NACC1Q96RE7 527 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms