RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 INHBEP58166 350 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-210ENST00000622533 PPP1R7Q15435 360 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 TMEM266Q2M3C6 531 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 KIAA0895Q8NCT3 520 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 WDR66Q8TBY9 1149 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 LRRC15Q8TF66 581 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 NSMCE1Q8WV22 266 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 NOX5Q96PH1 765 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 SEMA6BQ9H3T3 888 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 KIF9Q9HAQ2 790 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 RIC8AQ9NPQ8 531 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 SEC63Q9UGP8 760 aaKnown RBP14.3□□□□□ -0.12
CHD1L-210ENST00000622533 L3MBTL1Q9Y468 752 aa14.3□□□□□ -0.12
CHD1L-210ENST00000622533 MYH14Q7Z406 1995 aaKnown RBP14.3□□□□□ -0.12
CHD1L-210ENST00000622533 ESYT2A0FGR8 921 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 SMCO2A6NFE2 343 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 BUB1BO60566 1050 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-210ENST00000622533 SLC8A1P32418 973 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-210ENST00000622533 SARNPP82979 210 aaKnown RBP14.29□□□□□ -0.12
CHD1L-210ENST00000622533 CDC37Q16543 378 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-210ENST00000622533 DDX42Q86XP3 938 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD1L-210ENST00000622533 SPDL1Q96EA4 605 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 MGRN1O60291 552 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 HSD17B3P37058 310 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 XRCC4Q13426 336 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 PROM2Q8N271 834 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 MAGEC3Q8TD91 643 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 TCP11Q8WWU5 503 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 MMRN2Q9H8L6 949 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 ROBO1Q9Y6N7 1651 aa14.29□□□□□ -0.12
CHD1L-210ENST00000622533 RAD51CO43502 376 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 TECP42680 631 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 MREGQ8N565 214 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 SYN2Q92777 582 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 RSRC1Q96IZ7 334 aaKnown RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 LDHCP07864 332 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 SLC1A4P43007 532 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.124e-8■■■■□ 20.2
CHD1L-210ENST00000622533 PPP4CP60510 307 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 IRX1P78414 480 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 C11orf91Q3C1V1 193 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 LARP4BQ92615 738 aaKnown RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 SLC39A2Q9NP94 309 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 CLTAP09496 248 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 KLRK1P26718 216 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 GRIK3Q13003 919 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 SEPT2Q15019 361 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 UAP1Q16222 522 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 CACNA2D4Q7Z3S7 1137 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 ARFGAP2Q8N6H7 521 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 MDM1Q8TC05 714 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 DYNLL2Q96FJ2 89 aa14.28□□□□□ -0.12
CHD1L-210ENST00000622533 MMTAG2Q9BU76 263 aaKnown RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 NOVA2Q9UNW9 492 aaKnown RBP14.28□□□□□ -0.12
CHD1L-210ENST00000622533 LRRC53A6NM62 1247 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.12
CHD1L-210ENST00000622533 ZNF844Q08AG5 666 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 PDIA5Q14554 519 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 PDXDC1Q6P996 788 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 REXO1Q8N1G1 1221 aaKnown RBP14.27□□□□□ -0.12
CHD1L-210ENST00000622533 CEP120Q8N960 986 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 CCT6BQ92526 530 aa14.27□□□□□ -0.12
CHD1L-210ENST00000622533 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 PTPROQ16827 1216 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 TBCKQ8TEA7 893 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 WHAMMQ8TF30 809 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 LMBR1Q8WVP7 490 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 CUL5Q93034 780 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 HPS3Q969F9 1004 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 ACSBG1Q96GR2 724 aa14.27□□□□□ -0.13
CHD1L-210ENST00000622533 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
CHD1L-210ENST00000622533 ENO4A6NNW6 628 aa14.26□□□□□ -0.13
CHD1L-210ENST00000622533 PALMO75781 387 aa14.26□□□□□ -0.13
CHD1L-210ENST00000622533 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
CHD1L-210ENST00000622533 CALCRLQ16602 461 aa14.26□□□□□ -0.13
CHD1L-210ENST00000622533 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
CHD1L-210ENST00000622533 GKAP1Q5VSY0 366 aaPredicted RBP14.26□□□□□ -0.13
CHD1L-210ENST00000622533 BAP1Q92560 729 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms