RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CHMP2AO43633 222 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 COBLO75128 1261 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 POTEBQ6S5H4 581 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 MIER3Q7Z3K6 550 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 DPP9Q86TI2 863 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 SMAP1Q8IYB5 467 aaPredicted RBP15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 DNM3Q9UQ16 869 aa15.92■□□□□ 0.14
CLTCL1-212ENST00000622493 LRRC37A2A6NM11 1700 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 WDR64B1ANS9 1081 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 DDX39AO00148 427 aaKnown RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 SLITRK3O94933 977 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 P4HBP07237 508 aaKnown RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 NLRP12P59046 1061 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 MSL3Q8N5Y2 521 aaKnown RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 LRRC15Q8TF66 581 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 C7orf25Q9BPX7 421 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 PLXNA1Q9UIW2 1896 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 NEDD9Q14511 834 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 CNNM4Q6P4Q7 775 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 SEPT14Q6ZU15 432 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 KCNK18Q7Z418 384 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 STAMQ92783 540 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 TRIM9Q9C026 710 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 NAT10Q9H0A0 1025 aaKnown RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 JPH1Q9HDC5 661 aaPredicted RBP15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 RMND1Q9NWS8 449 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 SAMM50Q9Y512 469 aa15.91■□□□□ 0.14
CLTCL1-212ENST00000622493 MAP2K2P36507 400 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 MRE11P49959 708 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 CYP4A11Q02928 519 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 CUL4BQ13620 913 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 ANO6Q4KMQ2 910 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 MORN1Q5T089 497 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 FAM200AQ8TCP9 573 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 DYDC2Q96IM9 177 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 NACC1Q96RE7 527 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 RGL1Q9NZL6 768 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 SLC9A2Q9UBY0 812 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 PCDHA10Q9Y5I2 948 aa15.9■□□□□ 0.14
CLTCL1-212ENST00000622493 POTEFA5A3E0 1075 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 E9PMD0 336 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 BIN1O00499 593 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 AOC2O75106 756 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 PLA2G4BP0C869 781 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 MORC3Q14149 939 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 MCM6Q14566 821 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 TPH2Q8IWU9 490 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 MAML3Q96JK9 1138 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 GTPBP4Q9BZE4 634 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 RBSNQ9H1K0 784 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 BLZF1Q9H2G9 400 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 GRPEL1Q9HAV7 217 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 VTA1Q9NP79 307 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
CLTCL1-212ENST00000622493 LYPLA2O95372 231 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 EYA4O95677 639 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CCNE2O96020 404 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 HOXC6P09630 235 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 QARSP47897 775 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 ZNF165P49910 485 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 SP2Q02086 613 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 MAP2K5Q13163 448 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CTTNQ14247 550 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 KCNB1Q14721 858 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 SYT2Q8N9I0 419 aaPredicted RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 MLKLQ8NB16 471 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 UBE2Q2Q8WVN8 375 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 SOCS4Q8WXH5 440 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 LXNQ9BS40 222 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CFHR5Q9BXR6 569 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 DNAJC25Q9H1X3 360 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 SYNGAP1Q96PV0 1343 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 PVALEFA0A1B0GWK0 134 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 DKC1O60832 514 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■■□ 22.2
CLTCL1-212ENST00000622493 RPN1P04843 607 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 PSAPP07602 524 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 UBA1P22314 1058 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CASP1P29466 404 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 PSMC5P62195 406 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 IRF5Q13568 498 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 DPCR1Q3MIW9 517 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 CT47A1Q5JQC4 288 aaPredicted RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 EEPD1Q7L9B9 569 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 SCFD2Q8WU76 684 aa15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-212ENST00000622493 LOXHD1Q8IVV2 1947 aa15.87■□□□□ 0.13
CLTCL1-212ENST00000622493 ATG7O95352 703 aa15.87■□□□□ 0.13
CLTCL1-212ENST00000622493 SLC12A3P55017 1021 aa15.87■□□□□ 0.13
CLTCL1-212ENST00000622493 PSMC6P62333 389 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms