RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 VTI1AQ96AJ9 217 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 TSEN34Q9BSV6 310 aaKnown RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 GNEQ9Y223 722 aaKnown RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 RANBP2P49792 3224 aaKnown RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 NR3C2P08235 984 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 MYCLP12524 364 aaPredicted RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 GRIN1Q05586 938 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 NCAPHQ15003 741 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 EARS2Q5JPH6 523 aaKnown RBP24.21■■□□□ 1.47
SGMS1-210ENST00000619438 KLHDC9Q8NEP7 349 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 SCFD2Q8WU76 684 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 PSTPIP2Q9H939 334 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 PHF24Q9UPV7 400 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 ACLYP53396 1101 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 NLRP5P59047 1200 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 IRX5P78411 483 aaPredicted RBP24.2■■□□□ 1.46
SGMS1-210ENST00000619438 PNOCQ13519 176 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 DUSP28Q4G0W2 176 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 SLC39A5Q6ZMH5 540 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 SEPT14Q6ZU15 432 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 Q9Y3F1 56 aa24.2■■□□□ 1.46
SGMS1-210ENST00000619438 MYADML2A6NDP7 307 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 FAM205CA6NFA0 338 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 MOXD2PA6NHM9 499 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 BIN1O00499 593 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 NEMFO60524 1076 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 EIF3JO75822 258 aaKnown RBP24.19■■□□□ 1.46
SGMS1-210ENST00000619438 TTLL4Q14679 1199 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 TTC38Q5R3I4 469 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 TMEM63BQ5T3F8 832 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 GALNT17Q6IS24 598 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 CSRNP2Q9H175 543 aa24.19■■□□□ 1.46
SGMS1-210ENST00000619438 UPF3AQ9H1J1 476 aaKnown RBP24.19■■□□□ 1.46
SGMS1-210ENST00000619438 RBM47A0AV96 593 aaKnown RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 TPM2P07951 284 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 TXNP10599 105 aaKnown RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 BEX3Q00994 111 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 USP17L6PQ6QN14 398 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 GPKOWQ92917 476 aaPredicted RBP eCLIP24.18■■□□□ 1.461e-6■□□□□ 9.3
SGMS1-210ENST00000619438 GLT1D1Q96MS3 346 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 PDCD2LQ9BRP1 358 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 PYCARDQ9ULZ3 195 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 A0A1W2PQ45 241 aaPredicted RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 A0A1W2PQY0 241 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 POLR2DO15514 142 aaKnown RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 ZEB2O60315 1214 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 ASGR1P07306 291 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 CST5P28325 142 aaPredicted RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 ATP2C1P98194 919 aaPredicted RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 POSTNQ15063 836 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 FSCN1Q16658 493 aaKnown RBP24.18■■□□□ 1.46
SGMS1-210ENST00000619438 TRIML1Q8N9V2 468 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 DAGLBQ8NCG7 672 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 STARD7Q9NQZ5 370 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 ATP11BQ9Y2G3 1177 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 PCDHA5Q9Y5H7 936 aa24.18■■□□□ 1.46
SGMS1-210ENST00000619438 ACTN4O43707 911 aaKnown RBP24.17■■□□□ 1.46
SGMS1-210ENST00000619438 SARSP49591 514 aaKnown RBP24.17■■□□□ 1.46
SGMS1-210ENST00000619438 PGM5Q15124 567 aa24.17■■□□□ 1.46
SGMS1-210ENST00000619438 CCDC34Q96HJ3 373 aa24.17■■□□□ 1.46
SGMS1-210ENST00000619438 NKRFO15226 690 aaKnown RBP eCLIP24.16■■□□□ 1.46
SGMS1-210ENST00000619438 NAPAP54920 295 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 RTP1P59025 263 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 SPECC1Q5M775 1068 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 CCSAPQ6IQ19 270 aaPredicted RBP24.16■■□□□ 1.46
SGMS1-210ENST00000619438 OR6J1Q8NGC5 347 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 SPATA20Q8TB22 786 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 IMPACTQ9P2X3 320 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 PCDHA4Q9UN74 947 aa24.16■■□□□ 1.46
SGMS1-210ENST00000619438 LRRC37A2A6NM11 1700 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 ATP2B1P20020 1258 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 CCND2P30279 289 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 MYL5Q02045 173 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 DHX8Q14562 1220 aaKnown RBP24.15■■□□□ 1.46
SGMS1-210ENST00000619438 BRDTQ58F21 947 aaPredicted RBP24.15■■□□□ 1.46
SGMS1-210ENST00000619438 WWC2Q6AWC2 1192 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 VSIG10LQ86VR7 867 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 BLIDQ8IZY5 108 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 CCDC148Q8NFR7 591 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 SERTAD1Q9UHV2 236 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 ZMYND8Q9ULU4 1186 aaPredicted RBP24.15■■□□□ 1.46
SGMS1-210ENST00000619438 PIK3CDO00329 1044 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 MEIS2O14770 477 aa24.15■■□□□ 1.46
SGMS1-210ENST00000619438 M0R2N6 131 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 SYN1P17600 705 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 NKX3-2P78367 333 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 LY6KQ17RY6 165 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 CT47A1Q5JQC4 288 aaPredicted RBP24.14■■□□□ 1.45
SGMS1-210ENST00000619438 MLKLQ8NB16 471 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 COPS5Q92905 334 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 ZFP91Q96JP5 570 aaPredicted RBP24.14■■□□□ 1.45
SGMS1-210ENST00000619438 PYM1Q9BRP8 204 aaKnown RBP24.14■■□□□ 1.45
SGMS1-210ENST00000619438 PRKAG2Q9UGJ0 569 aa24.14■■□□□ 1.45
SGMS1-210ENST00000619438 SPDYE3A6NKU9 549 aa24.13■■□□□ 1.45
SGMS1-210ENST00000619438 hCG_1984214I3L0E3 225 aa24.13■■□□□ 1.45
SGMS1-210ENST00000619438 CPT1AP50416 773 aa24.13■■□□□ 1.45
SGMS1-210ENST00000619438 GSDMDP57764 484 aa24.13■■□□□ 1.45
SGMS1-210ENST00000619438 TRIM60Q495X7 471 aa24.13■■□□□ 1.45
SGMS1-210ENST00000619438 ARL6IP4Q66PJ3 421 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms