RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 OR6B2Q6IFH4 312 aa19.17■□□□□ 0.66
ATXN2-227ENST00000616825 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
ATXN2-227ENST00000616825 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
ATXN2-227ENST00000616825 LRRD1A4D1F6 860 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 HOXA13P31271 388 aaPredicted RBP19.16■□□□□ 0.66
ATXN2-227ENST00000616825 ALKBH5Q6P6C2 394 aaKnown RBP19.16■□□□□ 0.66
ATXN2-227ENST00000616825 TRIM42Q8IWZ5 723 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 MASTLQ96GX5 879 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 DDIT3P35638 169 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 MCAMP43121 646 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 OSTNP61366 133 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 SLFN12LQ6IEE8 588 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 MYLK4Q86YV6 388 aaPredicted RBP19.16■□□□□ 0.66
ATXN2-227ENST00000616825 MICAL1Q8TDZ2 1067 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 SLC10A4Q96EP9 437 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 PBKQ96KB5 322 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 CPP00450 1065 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 KRT1P04264 644 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 GOLGA8FQ08AF8 430 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 GOLGA8DPQ0D2H9 430 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 ATP6V1E2Q96A05 226 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 PAGE5Q96GU1 130 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 ADAMTS1Q9UHI8 967 aa19.16■□□□□ 0.66
ATXN2-227ENST00000616825 ATP8B1O43520 1251 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 CD58P19256 250 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 CYP27A1Q02318 531 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 AP3B2Q13367 1082 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 SNX1Q13596 522 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 TRIM56Q9BRZ2 755 aaKnown RBP19.15■□□□□ 0.66
ATXN2-227ENST00000616825 ZNF341Q9BYN7 854 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 NDUFA10O95299 355 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 SERPING1P05155 500 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 SRGAP2CP0DJJ0 459 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 FAN1Q9Y2M0 1017 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 CYP27B1O15528 508 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 FTCDO95954 541 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 CLTAP09496 248 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 TMTC3Q6ZXV5 915 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 EFCAB13Q8IY85 973 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 ANGPTL3Q9Y5C1 460 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 KDM5AP29375 1690 aaKnown RBP19.15■□□□□ 0.66
ATXN2-227ENST00000616825 BASP1P80723 227 aaKnown RBP19.15■□□□□ 0.66
ATXN2-227ENST00000616825 SIX6OS1Q8N1H7 587 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 TTC1Q99614 292 aa19.15■□□□□ 0.66
ATXN2-227ENST00000616825 GOLGA8QA0A0J9YX86 632 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 GOLGA8OA6NCC3 632 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 GOLGA8NF8WBI6 632 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 PRPSAP2O60256 369 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 LARGE1O95461 756 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 ZBTB33Q86T24 672 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 VSTM4Q8IW00 320 aa19.14■□□□□ 0.66
ATXN2-227ENST00000616825 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.14■□□□□ 0.66
ATXN2-227ENST00000616825 EVI5O60447 810 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 MSH2P43246 934 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 RAB44Q7Z6P3 723 aaPredicted RBP19.14■□□□□ 0.65
ATXN2-227ENST00000616825 ACRBPQ8NEB7 543 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 CCHCR1Q8TD31 782 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 NLRP4Q96MN2 994 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 RPF1Q9H9Y2 349 aaKnown RBP19.14■□□□□ 0.65
ATXN2-227ENST00000616825 CPSF2Q9P2I0 782 aaKnown RBP19.14■□□□□ 0.65
ATXN2-227ENST00000616825 TLK1Q9UKI8 766 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 CCDC151A5D8V7 595 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 S100BP04271 92 aaPredicted RBP19.14■□□□□ 0.65
ATXN2-227ENST00000616825 DHX9Q08211 1270 aaKnown RBP19.14■□□□□ 0.65
ATXN2-227ENST00000616825 TMTC4Q5T4D3 741 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 RNF207Q6ZRF8 634 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 SDCCAG3Q96C92 435 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 PNMA3Q9UL41 463 aa19.14■□□□□ 0.65
ATXN2-227ENST00000616825 HMGB1P1B2RPK0 211 aaPredicted RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PLEKHA8P1O95397 391 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 CXCR5P32302 372 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 DYNLT1P63172 113 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PTPN21Q16825 1174 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 ZNF449Q6P9G9 518 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 ARHGEF18Q6ZSZ5 1173 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 RYBPQ8N488 228 aaPredicted RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 ATF5Q9Y2D1 282 aaPredicted RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 ZMYND10O75800 440 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PRDX5P30044 214 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 NFX1Q12986 1120 aaKnown RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PODNQ7Z5L7 613 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 RNF139Q8WU17 664 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 HAUS8Q9BT25 410 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 Q9H521 79 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 SH3GLB2Q9NR46 395 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PEX3P56589 373 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 CTTNQ14247 550 aaKnown RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 IQCB1Q15051 598 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 HLFQ16534 295 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 DARS2Q6PI48 645 aaKnown RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.13■□□□□ 0.653e-6■■■■■ 48.4
ATXN2-227ENST00000616825 NCAPGQ9BPX3 1015 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 NHEJ1Q9H9Q4 299 aaPredicted RBP19.13■□□□□ 0.65
ATXN2-227ENST00000616825 KRT10P13645 584 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 PCGF5Q86SE9 256 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 CCDC197Q8NCU1 140 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 MCPH1Q8NEM0 835 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 HVCN1Q96D96 273 aa19.13■□□□□ 0.65
ATXN2-227ENST00000616825 MSTO1Q9BUK6 570 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms