RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SEPT1Q8WYJ6 367 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 SDF4Q9BRK5 362 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 CDH23Q9H251 3354 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 TET1Q8NFU7 2136 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 NFASCO94856 1347 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 IPO5O00410 1097 aaKnown RBP19.01■□□□□ 0.63
CBWD3-211ENST00000615061 DHX15O43143 795 aaKnown RBP19.01■□□□□ 0.63
CBWD3-211ENST00000615061 SUPT20HL2P0C7V6 817 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 CCL23P55773 120 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 NR5A1Q13285 461 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 MFSD5Q6N075 450 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
CBWD3-211ENST00000615061 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
CBWD3-211ENST00000615061 WDR81Q562E7 1941 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 FAM205CA6NFA0 338 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 TDP2O95551 362 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 CCNE2O96020 404 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 CSF2RAP15509 400 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 USP11P51784 963 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 ACTR2P61160 394 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 FPGSQ05932 587 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.63
CBWD3-211ENST00000615061 C9orf50Q5SZB4 431 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 TDHQ8IZJ6 230 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 GJA10Q969M2 543 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 PCYT2Q99447 389 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 NOD1Q9Y239 953 aa19■□□□□ 0.63
CBWD3-211ENST00000615061 MARK3P27448 753 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
CBWD3-211ENST00000615061 KRT40Q6A162 431 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 KRT25Q7Z3Z0 450 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 SCLYQ96I15 445 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 RNPEPQ9H4A4 650 aa18.99■□□□□ 0.63
CBWD3-211ENST00000615061 MYH9P35579 1960 aaKnown RBP18.99■□□□□ 0.63
CBWD3-211ENST00000615061 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 MSH4O15457 936 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 GUCY1B3Q02153 619 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 SHHQ15465 462 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
CBWD3-211ENST00000615061 LLPHQ9BRT6 129 aaKnown RBP18.98■□□□□ 0.63
CBWD3-211ENST00000615061 BTBD18B2RXH4 712 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 MMP1P03956 469 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 KRT2P35908 639 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 GLG1Q92896 1179 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 TNFRSF25Q93038 417 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 WNT8BQ93098 351 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 TMX3Q96JJ7 454 aa18.98■□□□□ 0.63
CBWD3-211ENST00000615061 ZNF215Q9UL58 517 aaPredicted RBP18.98■□□□□ 0.63
CBWD3-211ENST00000615061 TANC1Q9C0D5 1861 aa18.97■□□□□ 0.63
CBWD3-211ENST00000615061 A0A1W2PPC1 479 aa18.97■□□□□ 0.63
CBWD3-211ENST00000615061 ACRP10323 421 aa18.97■□□□□ 0.63
CBWD3-211ENST00000615061 LETM2Q2VYF4 491 aa18.97■□□□□ 0.63
CBWD3-211ENST00000615061 SETD4Q9NVD3 440 aa18.97■□□□□ 0.63
CBWD3-211ENST00000615061 SOX1O00570 391 aaPredicted RBP18.96■□□□□ 0.63
CBWD3-211ENST00000615061 LGR5O75473 907 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 HOXC8P31273 242 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 FXR1P51114 621 aaKnown RBP eCLIP18.96■□□□□ 0.63
CBWD3-211ENST00000615061 DIS3L2Q8IYB7 885 aaKnown RBP18.96■□□□□ 0.63
CBWD3-211ENST00000615061 TMEM199Q8N511 208 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 EMSYQ7Z589 1322 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 CYP3A7-CYP3A51PA0A087WV96 503 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 C17orf102A2RUQ5 167 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 TREHO43280 583 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 SLC37A4O43826 429 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 ATG7O95352 703 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 CYP3A7P24462 503 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 TRIM29Q14134 588 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 Q4G0T1 1027 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 ABHD15Q6UXT9 468 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 VWCEQ96DN2 955 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
CBWD3-211ENST00000615061 SMARCAD1Q9H4L7 1026 aa18.96■□□□□ 0.63
CBWD3-211ENST00000615061 NEK8Q86SG6 692 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 CCDC60Q8IWA6 550 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-211ENST00000615061 ATP6V0A1Q93050 837 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 C8orf76Q96K31 380 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 MBOAT7Q96N66 472 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 BRMS1Q9HCU9 246 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 TBC1D22BQ9NU19 505 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 ERAP1Q9NZ08 941 aa18.95■□□□□ 0.62
CBWD3-211ENST00000615061 STAT5BP51692 787 aa18.94■□□□□ 0.62
CBWD3-211ENST00000615061 HMGN5P82970 282 aaKnown RBP18.94■□□□□ 0.62
CBWD3-211ENST00000615061 PPIGQ13427 754 aaKnown RBP eCLIP18.94■□□□□ 0.62
CBWD3-211ENST00000615061 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
CBWD3-211ENST00000615061 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
CBWD3-211ENST00000615061 AZI2Q9H6S1 392 aa18.94■□□□□ 0.62
CBWD3-211ENST00000615061 DDX25Q9UHL0 483 aaKnown RBP18.94■□□□□ 0.62
CBWD3-211ENST00000615061 IGKV6D-21A0A0A0MT36 114 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 PITPNM1O00562 1244 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 PTK7Q13308 1070 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 MOXD1Q6UVY6 613 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 SERINC5Q86VE9 423 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 FAM184AQ8NB25 1140 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
CBWD3-211ENST00000615061 ZBTB10Q96DT7 871 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms