RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PPP1R14CQ8TAE6 165 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 IPCEF1Q8WWN9 437 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 JPH3Q8WXH2 748 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ARHGEF2Q92974 986 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ELAC2Q9BQ52 826 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 OCSTAMPQ9BR26 566 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 RBCK1Q9BYM8 510 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 VCPKMTQ9H867 229 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 GPAMQ9HCL2 828 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 FANCFQ9NPI8 374 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 FKBP14Q9NWM8 211 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 HECAQ9UBI9 543 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PPARGC1AQ9UBK2 798 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CORO1CQ9ULV4 474 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 DYRK1BQ9Y463 629 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC171Q6TFL3 1326 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ESYT3A0FGR9 886 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 GOLGA6L4A6NEF3 574 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 GOLGA6L10A6NI86 522 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 RBAK-RBAKDNI3L0D1 243 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PLOD2O00469 737 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ASAP2O43150 1006 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 SMNDC1O75940 238 aaKnown RBP eCLIP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PNMA6AP0CW24 399 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PHKG2P15735 406 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CNGA1P29973 690 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CSTF2P33240 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 HSPA1LP34931 641 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 GNL1P36915 607 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 RACK1P63244 317 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PTK2Q05397 1052 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 HSPA14Q0VDF9 509 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 SLC9A5Q14940 896 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 MLC1Q15049 377 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ECM1Q16610 540 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 KLHL40Q2TBA0 621 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 TKFCQ3LXA3 575 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 FAM102BQ5T8I3 360 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 INTS11Q5TA45 600 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 FBXO38Q6PIJ6 1188 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 RALYLQ86SE5 291 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CEP57Q86XR8 500 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PJA1Q8NG27 643 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CTNNBL1Q8WYA6 563 aaPredicted RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 MAELQ96JY0 434 aaKnown RBP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PPM1MQ96MI6 270 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CTAGE1Q96RT6 745 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM55Q9BYV6 548 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PLCB1Q9NQ66 1216 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 HELLSQ9NRZ9 838 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 NDFIP2Q9NV92 336 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 NKIRAS2Q9NYR9 191 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 ZIM2Q9NZV7 527 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 GTF2IRD1Q9UHL9 959 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 PLAAQ9Y263 795 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 MAP3K5Q99683 1374 aa3.35□□□□□ -1.87
CBWD3-209ENST00000614377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.35□□□□□ -1.87
CBWD3-209ENST00000614377 CEP162Q5TB80 1403 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LRRC72A6NJI9 287 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LACTBL1A8MY62 500 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L15C9J2P7 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L10C9JJH3 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L13C9JLJ4 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L12C9JPN9 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L11C9JVI0 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L21D6R901 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L18D6R9N7 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L22D6RA61 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L17D6RBQ6 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L19D6RCP7 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L20D6RJB6 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 J3KRW8 73 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 WDR46O15213 610 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 KLHL41O60662 606 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CSPG5O95196 566 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LDHBP07195 334 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 RAD52P43351 418 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ACADSBP45954 432 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 MAP2K3P46734 347 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PMS2P54278 862 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 POLR2FP61218 127 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 AP2B1P63010 937 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ARHGAP4P98171 946 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 GSTM4Q03013 218 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP17L24Q0WX57 530 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CBX3Q13185 183 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 INAQ16352 499 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 GPR162Q16538 588 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 BBS9Q3SYG4 887 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CAVIN4Q5BKX8 364 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ZNF362Q5T0B9 420 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 FCRLBQ6BAA4 426 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CABP7Q86V35 215 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 DDX42Q86XP3 938 aaKnown RBP eCLIP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 APLFQ8IW19 511 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PLEKHM2Q8IWE5 1019 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms