RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TPH2Q8IWU9 490 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 TRMT44Q8IYL2 757 aaKnown RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 DNAJC19Q96DA6 116 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 FANCLQ9NW38 375 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 ADD3Q9UEY8 706 aaKnown RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 SOWAHBA6NEL2 793 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 EIF3JO75822 258 aaKnown RBP13.73□□□□□ -0.21
CBWD1-220ENST00000612045 CYP11B2P19099 503 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 PRCPP42785 496 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 ADSSL1Q8N142 457 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-220ENST00000612045 SHCBP1Q8NEM2 672 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 NEK9Q8TD19 979 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
CBWD1-220ENST00000612045 CTNND2Q9UQB3 1225 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
CBWD1-220ENST00000612045 EYA4O95677 639 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 EDNRBP24530 442 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
CBWD1-220ENST00000612045 STX17P56962 302 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 FSTL1Q12841 308 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 STK4Q13043 487 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 KCTD2Q14681 263 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 ARSHQ5FYA8 562 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 MMP19Q99542 508 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 PTPN18Q99952 460 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 LXNQ9BS40 222 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 RWDD2AQ9UIY3 292 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 SYNRGQ9UMZ2 1314 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
CBWD1-220ENST00000612045 SPATA31C2B4DYI2 1134 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 PGK2P07205 417 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
CBWD1-220ENST00000612045 FCER1AP12319 257 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 IDEP14735 1019 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 KCNA2P16389 499 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
CBWD1-220ENST00000612045 CCNA1P78396 465 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 KRT76Q01546 638 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 PAK1Q13153 545 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 STIM1Q13586 685 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 WDR78Q5VTH9 848 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 SPATA1Q5VX52 437 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 SAPCD2Q86UD0 394 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 RASAL3Q86YV0 1011 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 PIGOQ8TEQ8 1089 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 NELFBQ8WX92 580 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 NACC1Q96RE7 527 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 PORCNQ9H237 461 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
CBWD1-220ENST00000612045 WRAP73Q9P2S5 460 aaPredicted RBP13.71□□□□□ -0.21
CBWD1-220ENST00000612045 PASKQ96RG2 1323 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 NPHP3-ACAD11A0A0J9YXS1 232 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 CCNE2O96020 404 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 JAK3P52333 1124 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 EHHADHQ08426 723 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 HPS3Q969F9 1004 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.22
CBWD1-220ENST00000612045 PARK7Q99497 189 aaKnown RBP13.71□□□□□ -0.22
CBWD1-220ENST00000612045 EFCC1Q9HA90 598 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 SAMM50Q9Y512 469 aa13.71□□□□□ -0.22
CBWD1-220ENST00000612045 NFASCO94856 1347 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 ZBTB39O15060 712 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
CBWD1-220ENST00000612045 ZNF18P17022 549 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 SFNP31947 248 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 ICAM3P32942 547 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 PSMD2Q13200 908 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
CBWD1-220ENST00000612045 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 MRFAP1L1Q96HT8 127 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
CBWD1-220ENST00000612045 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 SAMSN1Q9NSI8 373 aaKnown RBP13.7□□□□□ -0.22
CBWD1-220ENST00000612045 PANK4Q9NVE7 773 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 MORF4L1Q9UBU8 362 aa13.7□□□□□ -0.22
CBWD1-220ENST00000612045 FRMD3A2A2Y4 597 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 B4DLN1 442 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 PSMA7O14818 248 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 COBLO75128 1261 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 CDC25BP30305 580 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 PPP1R2P41236 205 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms