RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CHRNA5P30532 468 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 ITIH3Q06033 890 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 GPS2Q13227 327 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 ADAM9Q13443 819 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 BMT2Q1RMZ1 405 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 BEND6Q5SZJ8 279 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 EPM2AIP1Q7L775 607 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 HDXQ7Z353 690 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 GLIS3Q8NEA6 775 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 GJA10Q969M2 543 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 PSMD1Q99460 953 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 P2RX7Q99572 595 aaKnown RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 PSME4Q14997 1843 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 A0A1W2PRG0 241 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 RCCD1A6NED2 376 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 OPLAHO14841 1288 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF263O14978 683 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SEC31AO94979 1220 aaKnown RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 ATP1A1P05023 1023 aaKnown RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SERPING1P05155 500 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF76P36508 570 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 KNOP1Q1ED39 458 aaKnown RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 USH1GQ495M9 461 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 SFMBT2Q5VUG0 894 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 NCAPH2Q6IBW4 605 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 ALS2CR12Q96Q35 445 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 METTL14Q9HCE5 456 aaKnown RBP11.52□□□□□ -0.57
PABPC1-224ENST00000610907 VAV3Q9UKW4 847 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
PABPC1-224ENST00000610907 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 GCOM1H8Y6P7 765 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 EPHB6O15197 1021 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 SASH3O75995 380 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 POLR2MP0CAP2 368 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 STAT3P40763 770 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 MAGEA1P43355 309 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 USP14P54578 494 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 JAG1P78504 1218 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF572Q7Z3I7 529 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 RUBCNQ92622 972 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 GMLQ99445 158 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 PLCB1Q9NQ66 1216 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 AIPL1Q9NZN9 384 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF70Q9UC06 446 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
PABPC1-224ENST00000610907 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
PABPC1-224ENST00000610907 IGLV3-22A0A075B6J6 115 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NPHP3-ACAD11A0A0J9YXS1 232 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ENC1O14682 589 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SLC16A3O15427 465 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NOL4O94818 638 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NFIL3Q16649 462 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 MAP9Q49MG5 647 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 HGSNATQ68CP4 663 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 CCDC70Q6NSX1 233 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NELFCDQ8IXH7 590 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PNKPQ96T60 521 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 HSD17B14Q9BPX1 270 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 EIF2AK1Q9BQI3 630 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 REEP2Q9BRK0 252 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms