RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 IGBP1P78318 339 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 BFSP2Q13515 415 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 ANKRD1Q15327 319 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
HDDC2-204ENST00000608295 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 GJA10Q969M2 543 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
HDDC2-204ENST00000608295 SIP14410 1827 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 JAK2O60674 1132 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 CDKL5O76039 1030 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 THPOP40225 353 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 PBX2P40425 430 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 TRMT1LQ7Z2T5 733 aaKnown RBP16.48■□□□□ 0.23
HDDC2-204ENST00000608295 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 VWCEQ96DN2 955 aa16.48■□□□□ 0.23
HDDC2-204ENST00000608295 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
HDDC2-204ENST00000608295 LAMA2P24043 3122 aaKnown RBP16.48■□□□□ 0.23
HDDC2-204ENST00000608295 IGLV3-22A0A075B6J6 115 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 CKBP12277 381 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 SELPP16109 830 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 ACTR2P61160 394 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 ZNF697Q5TEC3 545 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 LMBR1Q8WVP7 490 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 GTF3C6Q969F1 213 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 ZNF577Q9BSK1 485 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
HDDC2-204ENST00000608295 MEIS1O00470 390 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 BACH1O14867 736 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 TDP2O95551 362 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 CCNE2O96020 404 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 RABGGTBP53611 331 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 PTK7Q13308 1070 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 CAGE1Q8TC20 777 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 TRAPPC12Q8WVT3 735 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 PCYT2Q99447 389 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 WDR81Q562E7 1941 aa16.46■□□□□ 0.23
HDDC2-204ENST00000608295 NFASCO94856 1347 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 CHMP2AO43633 222 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 DNAJB2P25686 324 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 NPY5RQ15761 445 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 GRIK4Q16099 956 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 INF2Q27J81 1249 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 TCTN1Q2MV58 587 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 RPUSD2Q8IZ73 545 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 NSUN7Q8NE18 718 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 OXER1Q8TDS5 423 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 MTIF3Q9H2K0 278 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
HDDC2-204ENST00000608295 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
HDDC2-204ENST00000608295 FAM205CA6NFA0 338 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 NBNO60934 754 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 CYP3A4P08684 503 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 SMAD3P84022 425 aaKnown RBP16.44■□□□□ 0.22
HDDC2-204ENST00000608295 SETQ01105 290 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-204ENST00000608295 CCDC60Q8IWA6 550 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-204ENST00000608295 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 PBX4Q9BYU1 374 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 FAM49AQ9H0Q0 323 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-204ENST00000608295 TTYH1Q9H313 450 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-204ENST00000608295 SMARCAD1Q9H4L7 1026 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
HDDC2-204ENST00000608295 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-204ENST00000608295 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-204ENST00000608295 MAFGO15525 162 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 ACTN1P12814 892 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 MYOGP15173 224 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 GUCY1B3Q02153 619 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 MBTPS1Q14703 1052 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 GPNMBQ14956 572 aa16.43■□□□□ 0.22
HDDC2-204ENST00000608295 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms